Acidovorax sp. 1608163: EAG14_19530
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Entry
EAG14_19530 CDS
T05680
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
acio
Acidovorax sp. 1608163
Pathway
acio03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acio00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EAG14_19530
09124 Replication and repair
03420 Nucleotide excision repair
EAG14_19530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acio03021
]
EAG14_19530
03036 Chromosome and associated proteins [BR:
acio03036
]
EAG14_19530
03400 DNA repair and recombination proteins [BR:
acio03400
]
EAG14_19530
Enzymes [BR:
acio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EAG14_19530
Transcription machinery [BR:
acio03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EAG14_19530
Chromosome and associated proteins [BR:
acio03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EAG14_19530
DNA repair and recombination proteins [BR:
acio03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EAG14_19530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
HODM_asu-like
Motif
Other DBs
NCBI-ProteinID:
AYM97899
LinkDB
All DBs
Position
4385764..4388184
Genome browser
AA seq
806 aa
AA seq
DB search
MNAANTTPAPLAVSVRALCAFTARTGDLDLRFTPAPSALEGMESHRLVQGRRGDGYEAEV
ALSGLFQQLTVRGRADGFDAPRQQLEEIKTYRGQLDGVRPHQRALHWAQARVYGHLMCQA
RGMERLHVALVYVQTGTGQETELVETHTAADLQAHFEALCTRYLAWAHSEQQHRQARDGA
LAALAFPHGSFRAGQRELAVAVYRNVGPGQDGNEDGGRCLLAQAPTGIGKTLGTLFPLLQ
ASARKGLDKLFFLTAKGTGHALALDALARVHEQLSQPTQPIAQPTAQIPPLRVLDVLARD
KVCEHPDKACHGESCPLAQGFYDRLPAARQALAQHTSLWDGPAVRTTALAHDICPYYLAQ
EMAHWCDVAVADYHYFYDSAAMLYALTVAHGWKVGLLVDEAHNLPDRARRMYTAELHQGT
LADARAAATGPVRKALDALQRQWNAIHRDQVDTYCAHTALPEAFVQALQRAIGAVAEAQT
DTPLLPGDPVLALYLDALHFAAMAEQFGSHALLDVTLDAHRHGRRGTFSTLCIRNVVPAP
HLAARHAAAHSSVLFSGTLTPPAFYRDLLGLPPETGWVDVESPFHSGQLAVHTVGHLSTR
FADRAQSLAPMATLMAEQFARLPGNYLCFASSFDYLQRIAAQLQQAHPEVPQWQQTAGMD
DAARQGFLDRFQEGGQGIGFAVLGGAFSEGVDLPGHRLIGAFIATLGLPQVNPVNEEMRR
AMDRHFGAGKGYDYTYLFPGLRKVVQAAGRVIRTEQDEGVVFLIDDRYRRAPVRALLPAW
WALDGALPAQAGSDGNPPRRHPSRSG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcgaacaccacgcccgccccgctcgcggtctcggtgcgcgctctgtgtgcc
ttcaccgcccgcacgggcgacctggacctgcgctttacgcccgcgcccagcgcgctggag
ggcatggaaagccaccgcctggtgcagggccgccggggcgatggctatgaggccgaggtg
gcgctgagtggcctgttccagcagctcacggtgcgcgggcgggccgacgggtttgacgca
ccgcgccagcagctggaagagatcaagacctaccggggccagctggatggcgtgcgcccc
caccaacgtgcattgcactgggcccaggcccgcgtgtacggccacctcatgtgccaggcg
cgggggatggagcggctgcacgtggcactggtctatgtgcaaaccggcacggggcaagag
accgagctggtcgaaacccacaccgccgccgatctgcaagcgcactttgaagcgctgtgc
acgcgctacctggcctgggcgcacagcgagcagcagcaccgccaggcgcgggatggggcc
ctggcagcgctggcctttccgcatggcagctttcgcgccgggcaacgcgagctggccgtg
gcggtgtaccgcaacgtggggcctggccaagatggcaatgaagacggcggccgatgcctg
ctggcccaggcccccacgggcattggcaaaacgctgggcacgctgttcccgctgctgcag
gccagcgcccgcaaggggctggacaagctgttcttcctcacggccaagggcaccggccac
gcgctggcgcttgatgccttggcccgtgtgcacgagcaactgagccagcccacacagccc
atagcgcagcccactgcacagataccacccctgcgcgtgctggacgtgctggcacgcgac
aaggtctgcgagcaccccgacaaggcctgccacggcgaatcctgcccgctggcccagggc
ttttacgaccgactgcccgccgcacgccaggccctggcgcagcacaccagcctatgggac
ggcccggccgtgcgcaccactgcgctggcgcacgacatctgcccctactacctggcgcag
gagatggcgcactggtgcgatgtggcggtggccgactaccactacttctacgacagcgcc
gccatgctgtatgcgctgacggtggcgcatggctggaaggtgggcctgctggtggacgag
gcccacaacctgcccgaccgcgcccgccgcatgtacaccgccgagctgcaccagggcacg
ctggccgacgcccgcgctgccgccaccggccccgtgcgcaaggcgctggacgcgctgcaa
cggcagtggaacgccatccaccgcgaccaagtggacacgtactgtgcacacacagcgctg
cccgaggcctttgtgcaagcactgcagcgcgccattggcgcggtggccgaggcgcagacc
gatacgcccctgctgcccggcgacccggtgctggcgctgtacctggacgccctgcacttt
gccgccatggccgagcagttcggcagccacgcgctgctggacgtgacgctggacgcccac
cgccatgggcggcgcggcacattcagcacgctgtgcattcgcaacgtggtgcccgccccg
cacctggcggcgcgccacgcggcggcgcacagtagcgtgctgttttcgggcacgctcacg
ccgccagcgttctaccgcgacctgctgggcctgccgcccgagacgggctgggtggatgtg
gagtcgccctttcacagcgggcagctggcggtgcacacggtggggcacctgtcgacccgc
tttgccgaccgcgcgcagtcgctggcgcccatggcaacgctgatggccgagcagtttgcg
cgcctgccgggcaactacctgtgctttgccagcagctttgactacctgcagcgcattgcg
gcccagctgcagcaggcccaccccgaggtaccccagtggcagcaaaccgcgggcatggac
gacgcggcccgccagggttttttggaccgttttcaggagggcggccagggcattggcttt
gccgtgctgggcggtgcgttttcagaaggggtggacctgcccggccaccggctgattggc
gccttcatcgccacgctggggctgccgcaggtcaacccggtgaacgaagaaatgcgccgc
gcgatggaccggcactttggcgcgggcaaggggtatgactacacctacctcttcccgggc
ctgcgcaaggtggtgcaggcggcaggaagggtgattcgcaccgagcaggacgagggcgtg
gtgtttctgatcgacgaccgctaccgccgcgccccggtgcgggccctgctgcccgcatgg
tgggcgctggatggggcgctgccagcgcaagcggggagtgatgggaacccacctcgacgc
cacccaagccgttcgggctga
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