Acidovorax sp. 1608163: EAG14_21125
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Entry
EAG14_21125 CDS
T05680
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acio
Acidovorax sp. 1608163
Pathway
acio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAG14_21125 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acio03019
]
EAG14_21125 (recQ)
03400 DNA repair and recombination proteins [BR:
acio03400
]
EAG14_21125 (recQ)
Enzymes [BR:
acio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAG14_21125 (recQ)
Messenger RNA biogenesis [BR:
acio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EAG14_21125 (recQ)
DNA repair and recombination proteins [BR:
acio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EAG14_21125 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
AYM98161
LinkDB
All DBs
Position
4739844..4741703
Genome browser
AA seq
619 aa
AA seq
DB search
MSPAQSVLQSVFGYEQFRGPQQAIVEHVIGGSDALVLMPTGGGKSLCYQVPAIVRQQQGR
GVAIVVSPLIALMHDQVGALHEAGVSAAFLNSTLSYDETQDIELRLQTGDITLLYAAPER
LNTPRFLGLLDNLYQGGHLSLFAIDEAHCVSQWGHDFRPEYRALSLLHERYPQVPRIALT
ATADALTREDIIERLQLQDARLFISSFDRPNIRYTIVEKKDATTQLLRFIEREHAGDAGV
VYCQSRKRVEELAATLSDAGINALPYHAGLDAKVRQRHQDRFLREEGVVMVATIAFGMGI
DKPDVRFVGHVDMPKNIEGYYQETGRAGRDGLNADAWMAYGLQDVVNQRRMIDESPAGEE
FKQALRGKLDALLALAEATDCRRVRLLAYFGEESTPCGNCDNCLNPPAVWDATDAARKLL
STIYRVHQASGISFGTGHIMDILRGKKTEKVAQFGHEKISTFGIGADLTEPQLRGVLRQL
IATGAVGLQKVMLDSGHSFDTLCLTEGSRAVLKGEVPVQLRESVSSAPAKRTRKASAPPA
AAANLGPDAQVRFINLKAWRAEVAREHNLPAYVIFHDATLAAIAERSPTTLEDLQGISGM
GAKKLEAYGAEVLRVCAGS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
ttgtcccccgcacagtccgtactacaaagcgtcttcggttacgaacagttccgaggcccc
cagcaggccatcgttgagcatgtgattggcggcagcgatgcgctggtgctgatgcccacc
gggggaggcaaaagcctgtgctaccaggtgcccgccatcgtgcgccagcagcaggggcgt
ggggtggcgattgtggtgtcgccgctgattgcgctgatgcacgaccaggtgggggcgctg
cacgaggcgggggtgagcgcggcgtttctcaactccacgctgagctacgacgagacgcaa
gacattgagctgcgcctgcaaaccggcgacatcacgctgctgtatgccgcgcccgagcgg
ctcaatacaccgcgttttctgggtttgctcgacaacctttaccaaggcgggcacctgtcg
ctgtttgcgattgacgaagcgcattgcgtgagccaatgggggcacgacttccggcctgaa
taccgggcactgtcgctgctgcacgagcgctatccgcaggtgccgcgcattgccctgacg
gccacggccgatgccctcacgcgcgaagacatcatcgagcggctgcaactgcaggacgcg
cgcctgttcatcagcagctttgaccggcccaacatccgttacaccatcgtcgagaagaaa
gacgctaccacgcaactgctgcgctttatcgaacgcgagcacgccggggatgcgggcgtg
gtgtactgccagtcgcgcaagcgggtggaggagctggccgccacgctgagcgacgcgggc
atcaacgccctgccctaccacgcaggcctggacgccaaggtgcgccagcggcaccaagac
cgctttttgcgcgaggaaggcgtggtgatggtggccaccattgcgtttggcatgggcatc
gacaagcccgatgtgcgctttgtggggcatgtggacatgcccaagaacatcgagggctac
taccaggagacaggccgcgctggccgcgatgggttgaacgccgatgcctggatggcctat
ggcctgcaagacgtggtgaaccagcgccgcatgatcgacgagagcccggcgggcgaggag
ttcaaacaggcactgcgcggcaaactcgatgccctgctggccctggccgaggccaccgac
tgccgccgcgtgcggctgctggcctactttggagaggagtccacgccctgtggcaattgc
gacaactgcctgaacccacccgccgtgtgggatgccacggacgctgcccgcaagctgctg
tccaccatctatcgcgtgcaccaggccagcggcatcagctttggcactggccacatcatg
gacatcctgcgcggcaagaagaccgagaaggtcgcgcagtttgggcacgagaagatttcc
accttcggcattggcgccgacctgaccgagccgcagctgcgcggcgtgctgcgccagctc
atcgccaccggtgcggtgggcttgcaaaaggtgatgctggacagcggccacagctttgac
acgctgtgcctcaccgaaggctcacgcgcggtgctcaagggcgaggtgccggtgcagctg
cgcgaatcggtgtcctccgcccccgccaaacgcacgcgcaaggccagcgcccccccggct
gccgccgctaacctggggccggatgcgcaggtgcgcttcatcaacctcaaagcctggcgc
gccgaggtggcccgcgagcacaacctgcccgcttacgtcatcttccacgacgccacgctg
gcagccattgcagagcgcagccccaccacactggaggacctgcagggcatcagcggcatg
ggtgccaaaaagctggaggcgtatggggcagaggtgctgcgggtgtgcgctggcagctaa
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