Acidovorax carolinensis P4: CBP36_03870
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Entry
CBP36_03870 CDS
T04962
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
acip
Acidovorax carolinensis P4
Brite
KEGG Orthology (KO) [BR:
acip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acip03016
]
CBP36_03870
Enzymes [BR:
acip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CBP36_03870
Transfer RNA biogenesis [BR:
acip03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CBP36_03870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
ProQ_C
Myosin_N
WHD_RNase_II
SH3_VIII-1_N
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ART60714
UniProt:
A0A240UGT3
LinkDB
All DBs
Position
complement(820983..823055)
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AA seq
690 aa
AA seq
DB search
MHALFEEAGKFMAGRILSEAESSAQVELDSGKRVKVKAANLLLKFDKPAPSELMAQAQAL
AQTIELPLAWEFAPEDDFGFADLARDYFSDNATLAQQAGALFALHEAPHYFRRAGKGRFK
KAPAEILQQALAAIEKKKLIVQQISDWAEALGRGECPQPIREQLYKILFRPDKNAPEYKA
VVEASRATHLAPLDLLQKAGAIDSAYQFHWKRFLFDNFPKGTGFPQLTAPQPPADLPLAP
VQAYSIDDSQTTEIDDALSVQGLGTGTVVLGIHIAAPGLAIVPGTPLDQLGRSRLSTVYM
PGYKITMLPDEVVQIYTLDEGRANPAVSLYVTVNEATLEITGTETKLERVPVVANLRHDQ
LDHIVTEAWLTDPAVAVENTPQRLLDVRDQLSFLHRLAKSLKAQREVVRGKPENFNRPDY
NFRLVGNDKAEPSGSETVQITTRQRGAPLDLIVAEAAIVANSTWGSWMAELGVPGIYRSQ
ASMAPGVKVRMGTKALPHAGIGVKSYSWATSPLRRYVDLVNQWQIIACVRNGKTAALAAP
FKPKDAELFSIISSFDAAYSAYNGYQAGMERFWTLKYVEQNGITELNATVFKEGPGGSFL
VRADELPLVFPVLGAQNLPRGARLKVKLGEVDEITLDIHGTVIERLDDPDDTSDDGPVED
GEDDEAVAGPIAIAVDVNEAEGASPDNPAP
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcattgtttgaagaagccggcaaattcatggccggtcgtatcctgtccgaagct
gaaagctcggcccaagtcgagctcgattcgggcaagcgggtcaaggtgaaggcggcgaac
ctcctgttgaaatttgacaagcccgcgccgtcggagctgatggcccaggcgcaggcgctt
gcccagaccatcgagctgccgctggcctgggaattcgcgcccgaggacgatttcggcttt
gccgacctcgcgcgcgactatttttcggacaacgccacgctggcccagcaggccggcgcg
ctgttcgccctgcacgaggcgccgcactactttcgccgcgccggcaagggccgcttcaag
aaggcgcccgccgaaatcctgcagcaggcactggccgccatcgagaaaaagaaactgatc
gtgcagcagatcagcgactgggccgaggccctggggcgtggcgaatgcccgcagcccatc
cgcgagcagctctacaagattttgtttcgccccgacaagaacgcgcccgagtacaaggcc
gtggtcgaggccagccgcgccacacacctggcgccgctcgacctgctgcaaaaggccggc
gccatcgactcggcctaccagttccactggaagcgctttctgttcgacaacttccccaag
ggcacaggcttcccgcagctcactgcgccgcagccgccggccgacctgccgctggcgccg
gtgcaggcctattccatcgacgactcgcagaccaccgagatcgacgacgccctgtcggtg
cagggcttgggcacgggcactgtggtgctgggcatccacattgccgcgccgggcctcgcc
atcgtgccgggcacgccgctcgaccagctcggccgcagccgcctgtccaccgtctacatg
ccgggctacaagatcaccatgctgcccgacgaggtggtgcagatctacacgctggacgaa
ggccgtgccaatccggcggtgtcgctgtacgtcacggtgaacgaagccacgctggagatc
accggcaccgagacgaagctcgagcgcgtgcccgtggtggccaacctgcgccacgaccag
ctggaccacatcgtcaccgaggcgtggctgaccgacccggccgtggcggtcgaaaacacc
ccgcagcgcttgctggatgtgcgcgatcagctatcctttttgcaccgcctggccaagagc
ctcaaggcccagcgcgaagtggtgcgcggcaagcccgagaacttcaaccggcccgactac
aactttcgcctcgtgggcaacgacaaggccgaacccagcggttcggaaaccgtgcagatc
accacgcgccagcgcggcgcgccactcgacctgatcgtggcagaggccgccatcgtggcc
aacagcacctggggcagctggatggccgagctcggcgtgcccggcatctaccgcagccag
gccagcatggcgccgggcgtgaaggtgcgcatgggcaccaaggcgctgccgcacgccggc
attggcgtcaaaagctattcgtgggccacctcgccgctgcgccgctatgtcgatctggtg
aaccagtggcagatcattgcctgcgtgcgcaacggcaagaccgcggccctggcggccccc
ttcaagcccaaggacgccgaactgttctccatcatcagcagctttgacgcggcctacagc
gcctacaacggctaccaggccggcatggagcgcttctggacgctgaaatacgtggagcag
aacggcatcaccgagctcaacgccaccgtgttcaaggaaggcccgggcggcagctttctg
gtgcgggcggacgagcttccgctggtgttccccgtgctgggtgcgcaaaacctgccgcgc
ggcgcgcgcctgaaggtcaagctcggcgaggtggatgagatcacgctcgacatccacggc
accgtgatcgagcgcctggacgatcccgacgacaccagcgacgacggtccggtcgaggac
ggcgaggacgacgaagccgtggccgggcccatcgccattgccgtcgatgtgaacgaggcc
gagggcgccagccccgataatccagccccgtga
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