Acidovorax carolinensis P4: CBP36_08860
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Entry
CBP36_08860 CDS
T04962
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acip
Acidovorax carolinensis P4
Pathway
acip03030
DNA replication
acip03430
Mismatch repair
acip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBP36_08860
03430 Mismatch repair
CBP36_08860
03440 Homologous recombination
CBP36_08860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acip03032
]
CBP36_08860
03400 DNA repair and recombination proteins [BR:
acip03400
]
CBP36_08860
Enzymes [BR:
acip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBP36_08860
DNA replication proteins [BR:
acip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBP36_08860
DNA repair and recombination proteins [BR:
acip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBP36_08860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
RMI2
Motif
Other DBs
NCBI-ProteinID:
ART58942
UniProt:
A0A240UD13
LinkDB
All DBs
Position
1874446..1877994
Genome browser
AA seq
1182 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTNRIDDLAKSAARDGQPALAITDLNNLFGAIKFYKEMRGKGVKP
ILGAEILLEGEAGAAPSRMLVLVQGRQGYLNLSELLARAWTRNVVKAQAICTWEWLQELG
EGLIAISGAQAGAVGQALMKGDDVGAASLALRLAGIFPHRFYVEVQRAGRADDEAHVVAA
VQLAARLNLPVVATHPVQFATADDYEAHEARVCISEGEILGNQRRVRKFTREQYFKSSAQ
MQALFEDLPAALANSVEIARRCNISLVLGKPQLPNFPIPPVNGQVLSVEDYFRHVSFEGL
EDRLKLLFPDEAKRNAQRPRYVERLEFELNTILKMGFPGYFLIVGDFIQWAKTHGCPVGP
GRGSGAGSLVAYALKITDLDPLEYNLLFERFLNPERVSMPDFDIDFCQANRDRVIDYVKD
KYGKDAVSQIATFGTMAAKAAIRDVGRVMDMSYTFCDGISKLVPNKPGQSYTLAYPPNPK
KEGDKNNYALELEPVLAERVQKEEDVKTVIEMAQKLEGLTRNIGMHAGGVLIAPGKLTDF
CPLYQQPGSEAAVSQYDKDDVEAIGLVKFDFLGLATLTILEIAREFIMKRHKGQENFSFE
TIPLDDGPTYKLFSDGKTEAVFQFESRGMQGMLREARPSRLEDLIALNALYRPGPMDLIP
SFVNRKHGKEVVEYPHPLVEKVLSETYGIMVYQEQVMQTAQVLGGYSLGGADMLRRAMGK
KKAEEMAEHRAIFRKGAAEKGISQEKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWL
KVHYTAEFFCANMTVEMDDTDKLKVLFEDAQKNFGLTFEPPDVNRGTYRFEPVTDRVIRY
GLGAVKGTGQQAIDAIVAAREGRGEGPQGSTTGPFKSLFDFCVRVDKARLNKRTVEALIK
AGAFDSLNLNRAAMVASIDRAFDFAAATLANVNQGGLFDMMGDDAHGSSTQEPDLVDAVP
WGIKERLTQEKTAIGFYLSGHLFDEVAQEVRRFVRTQIDELLDSREPQILAGIISDFRVI
NGQRGKLGLFRLDDKSGVIEASADEALLNTYRNQLKEDEFVVMMGRLQLDHFSGGLRVKV
QQVWDLAGARARFGKYLHVVVGDRSPDVPRLVQEFPPRREESEQGDLLHGLRVRMGVRCM
AEQGAAVAELQLGDASRFYPTDAALAAWSAQVGTGSASVIYE
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcacctgcgcctgcacactgagttttccgtcgttgacggcaccaatcgcatc
gatgacctggccaagtccgcggccagggatggccagcctgcgctggccattaccgatctc
aacaatctctttggcgctatcaagttctacaaggaaatgcgcggcaaaggcgtcaagccg
attctgggcgctgaaatccttctggaaggcgaggcgggggcggcgccctcgcgcatgctg
gtgctggtgcaggggcgccagggctatctgaacctctccgaattgctggcgcgcgcctgg
acccgcaatgtggtcaaagcccaggccatctgtacctgggagtggttgcaggaactggga
gagggattgatcgcgatttcgggcgcccaggcgggcgcggtggggcaagctcttatgaaa
ggcgatgacgtcggggcggcgagtctggcgctgcggctggccggcatctttccgcaccgt
ttctatgtggaggtgcaacgggcgggtcgtgccgatgacgaggcccatgtcgtggccgca
gtgcagctggctgcgcggctcaatctaccggtggtcgccacgcatcccgtgcagttcgcc
accgccgacgactacgaggcccatgaggcccgggtctgcatttccgaaggtgaaattctg
ggcaaccagcggcgcgtgcgcaagttcacgcgcgagcagtatttcaagtcgtcagcacag
atgcaggcgctgtttgaggacctgcctgccgccctggccaattcggttgaaattgcccgc
cgttgcaacatcagcctggtgctgggcaagccgcagttgcccaatttccccatcccgccc
gtgaatgggcaggtgctgtcggtggaagattacttccgccacgtttccttcgaagggctg
gaggaccgcctcaagcttctatttcccgacgaagccaagcgcaacgcacagcggccgcgc
tatgtggagcggctggagttcgagctcaataccatcctgaagatgggttttcccggctac
tttttgattgtgggggacttcattcaatgggccaagacgcacggatgtcccgtgggacct
ggccgcggatctggcgcgggatccctggtggcctatgcgctcaagatcaccgatctggac
ccgctcgaatacaacctgctgtttgagcgtttcctgaatcccgagcgcgtgtcgatgccc
gacttcgacattgacttttgccaggcgaaccgtgaccgcgtgatcgactacgtcaaggac
aaatacggcaaggatgcggtaagccagatcgccaccttcggcaccatggccgccaaggcc
gccatacgtgacgtgggccgggtgatggacatgagctacacgttttgtgacggcatttcc
aagctggtgcccaacaagcctgggcagtcctacacgctggcttacccgcccaacccgaag
aaagagggcgacaagaacaattacgccctggagctggaacccgtgctggcggagcgggtg
caaaaggaagaagacgtcaagaccgtgatcgagatggcgcaaaagctggagggcttgacg
cgcaacatcggcatgcatgccggtggcgtgttgattgcgccgggcaagctcaccgatttc
tgcccgctgtaccagcagccgggcagcgaggcggccgtgagccagtacgacaaggacgat
gtggaggccatcggcctggtgaagttcgactttttgggcctggccacgctcaccatcctg
gagattgcgcgcgaattcatcatgaagcgccacaagggccaggagaacttcagtttcgag
accatcccgctcgatgatgggccgacctacaagctcttctccgatggcaagaccgaggcg
gtgttccagtttgaaagccgcggcatgcagggcatgctgcgcgaagcccgccccagtcgc
cttgaagacctgattgcgctgaacgcactgtaccgcccaggcccgatggacctgattccg
agcttcgtgaaccgcaagcacggtaaggaagtggtggagtatccgcatccgctggtcgag
aaggtgctgtctgaaacctacgggatcatggtctaccaggagcaggtgatgcagaccgcc
caggtgctgggtggctactcgctgggcggcgccgacatgctgcgccgggccatgggcaag
aagaaggccgaggaaatggccgagcaccgcgccatcttccgcaagggggccgcagaaaag
ggcatcagccaggagaaggccgacgaggtgttcgacctgatggaaaagttcgcgggctac
ggcttcaacaagtcgcacgcggccgcctattcgctgctggcctaccacacgggctggctc
aaggtgcactacacggccgagtttttctgcgccaacatgacggtggaaatggacgacacc
gacaagctcaaggtgctgtttgaagatgcgcagaagaattttggactgaccttcgagcca
ccggatgtgaatcgcggcacgtaccgtttcgagcccgtgaccgacagggtgatccgttac
ggcctgggtgccgtcaagggcacggggcagcaggccatcgatgccattgttgcggcccgt
gagggccggggcgaagggcctcagggctccaccacgggtccgttcaagagcctgtttgat
ttttgcgtgcgggtggacaaggcgcgcctgaacaagcgcaccgtcgaggcgctcatcaag
gcgggggcctttgactctctcaatctcaatcgcgctgccatggtggcctcgatcgaccgc
gcctttgactttgccgcagccacgctggccaacgtgaaccagggcggcctgttcgacatg
atgggcgacgacgcccatggctcgagcacgcaggagccagacctggtcgatgcggtgccc
tggggtatcaaggagcggctaacccaggagaaaacggccattggtttctatctttctggc
catctattcgacgaagtggcgcaggaggtgcgtcgctttgtgcgcacccagatcgacgag
ctactggacagccgcgagccccagattcttgcggggatcatcagcgactttcgcgtgatc
aacgggcagcggggcaagctgggcctgttccggctggatgacaaatcgggtgtcatcgag
gcgtcggccgacgaagccctgctcaatacctaccgcaatcaactcaaggaagacgagttc
gtggtcatgatggggcgcctgcagctggaccatttcagcgggggcctgcgggtgaaggtg
cagcaggtctgggatctggccggggcccgcgcgcggtttggcaaatacctccatgtggtg
gtgggtgacagatcccccgatgtgccgcgcctggtgcaggagtttcctccgcgccgtgaa
gaatccgaacagggtgatctgctgcatggactgcgcgttcgcatgggcgtgcgctgcatg
gccgagcagggcgccgcggtggccgagctgcagctgggcgatgccagccggttttatccc
accgacgcggcactggcagcctggagtgcccaggttggcacgggctctgcctccgtgatc
tatgaatga
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