Acidovorax carolinensis P4: CBP36_08990
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Entry
CBP36_08990 CDS
T04962
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
acip
Acidovorax carolinensis P4
Brite
KEGG Orthology (KO) [BR:
acip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acip03019
]
CBP36_08990
03009 Ribosome biogenesis [BR:
acip03009
]
CBP36_08990
Messenger RNA biogenesis [BR:
acip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CBP36_08990
Ribosome biogenesis [BR:
acip03009
]
Prokaryotic type
rRNA processing factors
CBP36_08990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
ART58965
UniProt:
A0A240UD00
LinkDB
All DBs
Position
1908123..1909610
Genome browser
AA seq
495 aa
AA seq
DB search
MQQDILINWSPQETRVAVVEHGAVQELHIERTLERGLVGNVYLGKVSRVLPGMQSAFIDI
GLERAAFLHVADVWQRQPDGEPPAFARKNEPQVPIEKQVFEGQALMVQVIKDPIGTKGAR
LSTQISIAGRLLVFLPQDGHVGVSQKIPGAERDALRARLQALVGDKSTGGGGGFILRTNG
EDSTDAELAEDIAYLRKTWARIKEASLKLPAMSLLHQDLDLLQRVLRDLVGDHTQTIRLD
SMEQFQRLRAFGQEFMPAAAGKLQHYKGERPIFDLYSIDEEVAKALGRRVDLKSGGYLIV
DQTEALTTIDVNTGGYVGARNFDDTIFKTNLEAAQAIARQLRLRNLGGIIIVDFIDMARD
DHQEAVLAEFKKQLARDRVKTMSGGFSQLGLVEMTRKRTRESLAHMLCEPCSACHGAGQV
KTARSVCYDVLREILREARQFNPREFRVVASPRVVELFLDEESQHLAGLSDFIGKPISLQ
AESAMGQEQYDIVLL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagacattctgatcaactggtcaccgcaggagacgcgcgtggccgtggtggag
catggcgccgtacaggagctgcacatcgagcgcacgctcgagcgcggtctggtgggcaac
gtttacctgggcaaggtgtcgcgcgtgctgccgggcatgcagtcggccttcatcgatatc
ggcctggaacgcgcggcctttttgcatgtggcagatgtctggcagcgccagcctgacggc
gagccacccgcatttgcgcgcaagaacgaaccgcaggtgccgattgaaaagcaggtgttc
gaaggccaggccctgatggtgcaggtcatcaaggaccccatcggtaccaagggtgcacgc
ctgtccacgcagatcagcattgcaggccgcctgctcgtgttcttgccgcaggacggccat
gtgggcgtgtcgcagaagatccccggcgccgagcgcgatgccctgcgcgctcggctgcag
gcgttggtgggcgacaagtccacgggtgggggcggcggtttcatcctccgtaccaacggt
gaggactccaccgacgccgagctggccgaggacattgcctacctgcgcaagacctgggcg
cgcatcaaggaggcctcgctcaagctgcccgcgatgtcgctgctgcaccaggacctggac
ctgctgcagcgcgtgctgcgcgacctcgtgggcgaccacacgcagaccattcggctggat
tcgatggagcagttccagcgattgcgggcttttggacaggaattcatgcccgctgctgcg
ggcaagctgcagcactacaagggcgagcgtccgattttcgatctgtactccattgacgaa
gaagtggccaaggccctggggcgccgggtcgatctgaaatcgggcggctatctcatcgtg
gatcagaccgaggcgcttaccaccatcgatgtgaataccggtggctatgtgggcgcgcgc
aatttcgacgacaccattttcaagaccaacctggaggcggcccaggccattgcccgccag
ctgcgcctgcgcaacttgggcggcatcatcatcgtggatttcattgatatggcccgcgac
gaccatcaggaggccgtgcttgccgagttcaagaagcagcttgcgcgcgaccgggtcaag
accatgtcgggtggcttttctcagttgggcctcgtcgagatgacgcgcaagcgcacccgt
gaatcgctcgcacacatgctgtgcgagccttgcagcgcgtgccatggggcaggacaggtg
aaaacggcgcgcagcgtttgctacgacgtattgcgagaaattctgcgtgaggcccgccaa
ttcaacccgcgcgagtttcgcgtggtggcttcgccccgagtggtggagctgtttctggac
gaggagagccagcatctggcgggtttgagcgatttcattggcaagcccatctcgcttcag
gccgagagtgcaatggggcaggagcaatacgacatcgtcctgctgtag
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