Acidovorax carolinensis P4: CBP36_14610
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Entry
CBP36_14610 CDS
T04962
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acip
Acidovorax carolinensis P4
Pathway
acip03420
Nucleotide excision repair
acip03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBP36_14610
03430 Mismatch repair
CBP36_14610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acip03400
]
CBP36_14610
Enzymes [BR:
acip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBP36_14610
DNA repair and recombination proteins [BR:
acip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBP36_14610
MMR (mismatch excision repair)
Other MMR factors
CBP36_14610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ART59896
UniProt:
A0A240UFJ6
LinkDB
All DBs
Position
complement(3161402..3163855)
Genome browser
AA seq
817 aa
AA seq
DB search
MFPQDPFSGAPEALVPPHAGAPSAASPLLANLNDEQLAAVTLPAGHALILAGAGSGKTRV
LTTRIAWLLQNGYATPGGILAVTFTNKAAKEMVARLSAMLPVNVRGMWIGTFHGLCNRLL
RAHHKAAGLSQSFQILDTQDQLSAIKRLCKQHNVDDERFPPKQLAYFIANCKEEGMRPGD
VPTHDSDARKKVEFYQLYEEQCQREGVVDFGELMLRSYELLRDNDPIREHYQRRFAHILV
DEFQDTNKLQYAWLKQLAGNEVNGRFEARGSVIAVGDDDQSIYAFRGARVGNMTDFVREF
DVQRQIKLEQNYRSYSNILDSANALISHNSRRLGKNLRTTQGAGEPVRVYEASSDLAEAQ
WMVDEIKQLVKSDGFERKEIAVLYRSNAQSRVIESALFNASVPYRVYGGLRFFERAEIKH
ALAYLRLLENPHDDTSFSRVVNFPPRGIGARSIEVLQDAARAAGCSLHDAVSAVPGKAGA
NLGAFVAMVDVLREQTQGLNLRGIIEQMLQSSGLVEHFRTEKEGADRIENLQELVNAAES
FVTQEGFGRDAVALPLDEHGTPLTQSAVSQGIDPNAPVLDEPLKPAVPGIVDIDTGETLS
PLAAFLSHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDGVFIGGLEEGLFPHENSASDR
DGLEEERRLMYVAITRARKRLYLSHSQTRMLHGQTRSNPKSRFFDELPEGALKWITPKQQ
GFGSYAPNSGAFSAYPSSARGQFGFKSETFASPPVPVQKTAPSHGLRAGINVFHTKFGEG
KVLAIEGTGDDARAQVNFPRHGTKWLALSVAKLTVVE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgttcccacaagacccgttttcgggtgcgccagaagccctggtgcccccacacgctggt
gcgccctcggctgcatcgcccctcctggccaacctgaacgacgagcaactggccgccgtc
acgctgcccgcaggccatgcgctcatcctggcgggggcgggctcgggcaagacgcgcgtg
ctcaccacccgcatcgcttggttgctgcaaaacggctacgccacgcccggcggcattctg
gccgtcacctttaccaacaaggccgccaaggaaatggttgcgcgcctgtcggccatgctg
ccggtgaacgtgcgtggcatgtggattggcaccttccacggcctgtgcaaccggctcttg
cgcgcgcaccacaaggcggcggggctgtcgcagtcgtttcaaattctggacacgcaagac
cagctctcggccatcaagcgtctgtgcaagcagcacaacgtggatgacgagcgttttccg
cccaagcaactggcctacttcattgccaactgcaaggaagaaggcatgcgccccggcgac
gtgcccacgcacgacagcgatgcgcgcaagaaagtcgagttctaccagctgtatgaagag
caatgccagcgcgaaggcgtggtggattttggcgagctgatgctgcgcagctacgaactg
ttgcgtgacaacgaccccattcgcgagcattaccagcgccgctttgcacacatcctggtg
gacgagttccaggacaccaacaagctgcaatacgcctggctcaagcagctggcaggcaac
gaggtgaatgggcgctttgaagcacgcggcagcgtgattgccgtgggcgacgacgaccag
agcatctacgcctttcgcggtgcgcgcgtgggcaacatgaccgacttcgtgcgcgagttt
gatgtgcagcgtcagatcaagctggagcagaactaccgcagctacagcaacatcctcgac
tcggccaacgccctcatcagccacaacagccgccgcctgggcaagaacctgcgcactaca
cagggcgcgggcgagcccgtgcgcgtgtacgaggccagctccgacctggccgaagcgcag
tggatggtcgacgagatcaagcagctggtgaagagcgacggttttgagcgcaaggaaatc
gccgtcctctaccgcagcaatgcgcaaagccgggtgatcgaatcggcgctgttcaatgcc
agcgtgccctaccgcgtgtatggcggcctgcgctttttcgagcgcgccgaaatcaagcac
gcgctggcctacctgcgcctcttggagaacccgcacgacgacaccagtttcagccgcgtg
gtcaactttccgccacgcggcatcggcgcgcgcagcatcgaggtgctgcaggacgctgcg
cgtgctgccggctgctcgctgcacgatgccgtgagcgccgtgcccggcaaggcgggcgcc
aacctgggcgcgtttgtcgccatggtcgatgtgctgcgcgagcagacgcagggcctgaac
ctgcgcggcatcatcgagcagatgctgcaatcctcggggctggtggagcactttcgcact
gaaaaggaaggcgccgaccgcatcgagaacttgcaggaactggtgaacgcggccgaaagt
tttgtcacgcaagaaggctttggccgcgacgccgtggccctgccactcgatgagcatggc
acaccgctcacgcaaagcgcggtcagccagggcatcgaccccaacgcgccggtgcttgat
gagcccttgaagcccgccgtgcccggcattgtggacatcgacaccggcgaaaccctgtca
ccgctggctgccttcctctcccatgccgcactggaagccggcgacaaccaggcccaggcc
gggcaagacgccgtgcaactgatgaccgtgcacgccagcaaaggcctggagtttgatggc
gtgttcatcggtggcctggaagagggcctgttcccccacgaaaactcggccagcgaccgc
gatggcctggaggaagaacgccgcctgatgtacgtagccatcacccgcgcgcgcaagcgc
ctgtacctgagccactcgcaaacgcgcatgctgcacggccagacgcgctccaatcccaag
agccgcttctttgacgagctgcccgaaggcgcactcaagtggatcacgcccaaacagcag
ggttttgggtcgtatgctcctaattcaggagcttttagcgcttacccttcaagcgctaga
ggccaatttggctttaaatctgaaacctttgccagcccgcccgtgccggtgcagaagacc
gcgccctcgcacggtctgcgcgcaggcatcaacgtgttccacaccaagtttggcgaaggc
aaggtgctggccatcgaaggcaccggcgacgatgcgcgcgcacaggtcaactttccgcga
cacggcaccaagtggctggcgctgagcgtggccaagctgacggtggtggagtga
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