Acidovorax carolinensis P4: CBP36_16540
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Entry
CBP36_16540 CDS
T04962
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
acip
Acidovorax carolinensis P4
Pathway
acip02020
Two-component system
acip02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acip00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CBP36_16540 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CBP36_16540 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acip03021
]
CBP36_16540 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
acip02035
]
CBP36_16540 (fliA)
Transcription machinery [BR:
acip03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CBP36_16540 (fliA)
Bacterial motility proteins [BR:
acip02035
]
Flagellar system
Flagellar assembly proteins
Stator
CBP36_16540 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
GerE
Motif
Other DBs
NCBI-ProteinID:
ART61004
UniProt:
A0A240U6J8
LinkDB
All DBs
Position
3558703..3559419
Genome browser
AA seq
238 aa
AA seq
DB search
MYTAKGQLDRDALIRQHVPLVRRIAHHMIAKLPPNVEVDDLIQVGMMGLAEALSRYEATQ
GVQFETFATQRIRGAMLDELREGDWMSRSSRKSQKDIEHAVRRLEQKLGRSPLESEIAAD
MGMPLAEYQSLLGKVRGTQLVYLEDMAHGNDDEDGFLDRHVADSDADPLELLRDHRLRSS
LVQAIQSLPEREQYIMGMYYEHDMNLKEIAAVLGVTESRVCQLHSQSIARLRAKMRSH
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtataccgccaaaggccagctcgaccgtgatgcgctgattcgccagcacgtaccgctg
gtgcgacggatcgcccaccacatgattgccaagctgccgcccaatgtggaggtggacgac
ctgatccaggtgggaatgatgggtctggcagaagcgctatcgcgctacgaagccacccag
ggggttcagttcgaaacctttgctacccagcgcatccggggcgccatgctggacgagttg
cgcgagggcgactggatgtcccgcagctcccgcaaaagccagaaagacatcgagcacgcc
gtgcggcggctggaacagaaactgggccgcagccccctcgaatcggaaattgccgccgac
atgggcatgccacttgccgaataccagagcctgcttggcaaggtgcgcggcacccagctg
gtgtatctggaagacatggcccacggcaatgacgacgaggatggttttctggaccgccac
gttgccgacagcgacgccgatcccctcgaactattgcgcgatcaccgccttcgctcctcc
ctggtccaggccatccagagcctgcccgagcgcgagcaatacatcatgggcatgtattac
gagcatgacatgaacctcaaggaaattgcagcggtgctgggcgttacggagtcacgggtg
tgccagttgcacagccagtcaattgcccgccttcgcgcaaagatgcgcagccactga
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