Acidovorax sp. DW039: ACDW_00030
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Entry
ACDW_00030 CDS
T10243
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aciq Acidovorax sp. DW039
Brite
Enzymes [BR:
aciq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACDW_00030 (gyrB)
DNA replication proteins [BR:
aciq03032
]
Prokaryotic type
DNA Topoisomerases
ACDW_00030 (gyrB)
DNA repair and recombination proteins [BR:
aciq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACDW_00030 (gyrB)
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NCBI-ProteinID:
BEU94298
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Position
2912..5554
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AA seq
880 aa
AA seq
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MTADNTPIEPTEPGSTGTGEPSTSSAPAAPKIDTNQPGASEGYGEGAIQILEGLEAVRKR
PGMYIGDTSDGTGLHHLVFEVVDNSIDEALAGHCDDIVVTIHTDNSLSVTDNGRGIPTGV
KMDDKHEPKRSAAEIALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSKWLRLTVRREG
KVHQIEFARGFVQNRLIETVDGVEISPMKVTGQTEKRGTEVHFLPDTEIFQQNNEFHYEI
LAKRLRELAFLNNGVRIRLKDERSGKEDDFSGAGGVKGFVDFINANKKVLHPTAFYATGS
RPADSYGGIPGTEIGVEVAMQWNDGFSEQVLCFTNNIPQRDGGTHLTGLRAAMTRVIGKY
ITDHELAKKAKVEVSGDDMREGLCCVLSVKVPEPKFSSQTKDKLVSSEVRAPVEDIVAKT
LTDYLEERPNDAKILCGKIIEAARAREAARKAREMTRRKGVLDGMGLPGKLADCQEKDPA
LCEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKARYEKLLSSQEIVTLITALGT
GIGKASAESGKSGADDFDVAKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPDLVERGH
IYIAQPPLYKVKNGKEELYLKDGPALDSFLLRVALNHASVTTGGANPQTLSGDTLAELAR
KHQTAEAVIARLSAFMDQEALRAIADGVEVKLDTVAEAEASAVAMQAKLAELSTTGVPPE
VAGEFDVRTDKPILRISRRHHGNVKSSVLTQDFVHGADYAALAEAANTFRGLLGEGAKAQ
RGEGDKAKEEKVTDFRQAMAWLISEAERTTARQRYKGLGEMNPEQLWETTMDPTVRRLLR
VQIEDAIEADRVFTMLMGDEVEPRRDFIETNALRAGNIDV
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgacaacacccccatcgagcccacagagccaggctccaccggcactggtgag
ccttcaacgtcctcagccccagcagccccgaagatcgacaccaaccagcccggcgcgtct
gaaggctacggcgaaggtgccatccagatcctggaaggcctggaagccgtgcgcaagcgc
cccggcatgtacatcggtgacaccagcgacggcaccggcctgcaccacctcgtgttcgag
gtggtggacaactccatcgacgaagccctggcgggccactgcgatgacatcgtcgtcacc
atccacaccgacaactccctgtctgtcaccgacaacggccgcggcattcccaccggcgtg
aagatggacgacaagcacgagcccaagcgcagtgccgcagaaattgccctgaccgaactg
cacgcgggcggcaagttcaaccagaacagctacaaggtctccggcggcttgcacggcgtg
ggtgtgagctgcgtgaacgcgctctccaaatggctgcgcctgacggtgcgccgcgagggc
aaggtgcaccagatcgagtttgcacgcggctttgtgcaaaaccgcctcatcgagacggtg
gacggcgtggaaatcagccccatgaaggtgaccggccagaccgaaaagcgcggcaccgaa
gtgcactttctgcccgacacggaaatcttccagcagaacaacgagttccactacgaaatc
ctggccaagcgcctgcgcgagctggcctttttgaacaacggtgtgcgcatccgcctcaag
gacgagcgcagcggcaaggaagacgacttctccggcgcaggcggcgtcaagggctttgtg
gacttcatcaacgccaacaagaaggtgctgcaccccaccgccttttacgccaccggcagc
cgcccagccgacagctacggcggcattcccggcaccgaaatcggtgtggaagtggccatg
cagtggaacgatggcttcagcgagcaggtgctctgctttaccaacaacatcccccagcgc
gacggcggcacccacctgacgggcctgcgcgccgccatgacccgcgtcatcggcaaatac
atcaccgaccacgaactggccaagaaggccaaggtggaagtcagcggtgacgacatgcgc
gaaggcctgtgctgcgtgctgagcgtgaaggtgcccgagcccaagttcagcagccagacc
aaggacaagctcgtctccagcgaagtgcgtgcgcccgtcgaagacatcgtcgccaagacg
ctgaccgactacctggaagagcgccccaacgacgccaagattttgtgcggcaagatcatt
gaagccgcccgcgcccgcgaagccgcccgcaaggcccgcgaaatgacgcgccgcaaaggc
gtgctcgacggcatgggcctgcccggcaagctggccgactgccaggaaaaagaccccgcc
ctgtgcgaaatctacatcgtggagggtgactccgccggtggctctgccaagcagggccgc
gaccgcaagttccaggccatcctgcccctgcgcggcaagatcctgaacgtagaaaaagcc
cgctacgaaaagctgctctccagccaggaaatcgtcaccctcatcaccgccctgggcacc
ggcattggcaaggccagcgccgaaagcggcaagagcggtgcggacgactttgacgtcgcc
aagctgcgctaccaccgcatcatcatcatgaccgacgcggacgtggacggagcccacatc
cgcaccctgctgctcaccttcttctaccgccagatgcccgatctggtggagcgcggccac
atctacatcgcccagccaccgctgtacaaggtgaagaacggcaaggaagagctttacctc
aaagacggccccgcgctcgacagcttcttgctgcgcgttgcgctgaaccacgccagcgtg
accaccggcggtgccaacccgcaaacactgagcggcgacaccctggccgaactggcccgc
aagcaccagacggccgaggccgtcatcgcccgcctctccgccttcatggaccaggaagcc
ctgcgcgccattgccgatggcgtggaagtgaagctagacaccgtggcagaagccgaagcc
agcgccgtggccatgcaggccaagctggccgaactctccaccaccggcgtgccccccgaa
gtggcgggcgagtttgacgtgcgcaccgacaaacccatcctgcgcatcagccgccgccac
cacggcaacgtcaagagcagcgtgctcacacaagactttgtgcacggagccgactacgcc
gccctggccgaagccgccaacaccttccgcggcctgctgggcgaaggtgccaaggcccag
cgcggcgaaggcgacaaggccaaggaagaaaaagtgaccgacttccgccaggccatggcc
tggctcatcagcgaagccgaacgcaccaccgcccgccagcgctacaagggtctgggcgaa
atgaaccccgagcagctgtgggaaaccaccatggaccccaccgtgcgccgcctgctgcgc
gtgcagatcgaggatgccatcgaggccgaccgcgtgttcaccatgctgatgggggatgag
gtggagccgcggcgggatttcattgagacgaatgcgctacgggcggggaatattgacgtc
tga
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