Acidovorax sp. DW039: ACDW_00650
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Entry
ACDW_00650 CDS
T10243
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aciq Acidovorax sp. DW039
Pathway
aciq03030
DNA replication
aciq03430
Mismatch repair
aciq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aciq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACDW_00650
03430 Mismatch repair
ACDW_00650
03440 Homologous recombination
ACDW_00650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aciq03032
]
ACDW_00650
03400 DNA repair and recombination proteins [BR:
aciq03400
]
ACDW_00650
Enzymes [BR:
aciq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACDW_00650
DNA replication proteins [BR:
aciq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACDW_00650
DNA repair and recombination proteins [BR:
aciq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACDW_00650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BEU94360
LinkDB
All DBs
Position
72488..73171
Genome browser
AA seq
227 aa
AA seq
DB search
MPSSPPIAVIDFETTGMSPSQGARATEVAIVLLEGGQVVDRFQSLMKTGAWIPAFITELT
GITNAMVQAAPDAATVMREAARFVGSAPMVAHNAGFDSKFWQAELALADVPAPHAFACTV
LLSRRIYPEAPTHKLGPLVDHLGLPRAGRAHRALADAEMAAALLARMQQDLARQWHVAQP
GFALLQAIQRTTRKALPQLLARHAQAAPSVSRQGHGSCPQQLSLLLD
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgccctcatcgccccccatcgccgtcatcgactttgaaaccaccggcatgtcgcccagc
cagggcgcgcgtgccaccgaggtggccatcgtgctgctggagggtgggcaggtggtggac
cggtttcagagcctgatgaaaaccggggcgtggattcctgccttcatcaccgagctgacg
ggcattaccaacgccatggtgcaggcagcgcccgatgccgcaacggtgatgcgcgaagct
gcccggtttgtgggcagcgcccccatggtggcgcacaacgcgggctttgacagcaagttc
tggcaggccgagctggcgctggccgatgtgcccgcgccccatgcctttgcctgcacggtg
ctgctgtcacgccgcatctacccggaggccccaacccacaagctgggaccgctggtagac
cacctgggcctgccgcgcgcaggccgcgcccaccgggccctggccgatgcagaaatggcc
gccgccttgctggcgcgcatgcagcaagacctggcccggcagtggcatgtggcgcagccg
ggctttgcgttgctgcaggccatacagcgcaccacgcgcaaggcactgccacagttgctg
gcccgccatgcgcaggcagctccatcggtctcccggcaaggccacggcagttgtccacag
caactgagtctgctattggattga
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