Acidovorax sp. DW039: ACDW_02400
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Entry
ACDW_02400 CDS
T10243
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aciq Acidovorax sp. DW039
Pathway
aciq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aciq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACDW_02400 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aciq03019
]
ACDW_02400 (recQ)
03400 DNA repair and recombination proteins [BR:
aciq03400
]
ACDW_02400 (recQ)
Enzymes [BR:
aciq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACDW_02400 (recQ)
Messenger RNA biogenesis [BR:
aciq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACDW_02400 (recQ)
DNA repair and recombination proteins [BR:
aciq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACDW_02400 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
BEU94535
LinkDB
All DBs
Position
complement(271483..273369)
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AA seq
628 aa
AA seq
DB search
MSTRALSAPTPAHAVLQDVFGYEQFRGPQQAIVEHVIGGGDALVLMPTGGGKSLCYQVPA
IVRQQQGKGVTIVVSPLIALMHDQVGALHEAGVDAAFLNSTLDFDATQDVEWRLQTGQIT
LLYAAPERLNTPRFLGLLDSLYDSGNLSLFAIDEAHCVSQWGHDFRPEYRALTLLHERYP
RVPRIALTATADALTREDIIERLQLQDARLFISSFDRPNIRYTIVEKKDATTQLLRFIER
EHAGEAGVVYCQSRKRVEELAATLSDAGINALPYHAGLDSKVRQNHQDRFLREEGIVMVA
TIAFGMGIDKPDVRFVAHVDMPKNIEGYYQETGRAGRDGLPAHAWMAYGLQDVMNQRRMI
DESPAAEEFKQALRGKLDALLALAEATDCRRVRLLAYFGEASTPCGNCDNCLNPPAVWDA
TDAARKLLSTIYRVHQASGIGFGAGHIMDILRGKKTDKVAQFGHDKLSTFGIGADLTEPQ
LRGVLRQLLATGAVGLQKVMLDSGMSFDTLCLTDGSRAVLKGEVPVQLRESVTAAAPKRT
RKSSAPPAAAANLGPDAQARFINLKAWRAEVAREHNLPAYVIFHDATLAAIADRNPASLD
DLQGISGMGAKKLEAYGAEVLRVCAQTA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
ttgtctacccgcgccctctccgctcccactcccgcccatgccgtcttgcaggacgtgttc
ggctacgaacagttcagaggcccccagcaggccatcgtcgagcatgtgattggcgggggc
gatgcgctggtgctgatgcccacgggcggcggcaagagcctgtgctaccaggtgccggcc
atcgtgcgccagcagcaaggcaagggggtgaccatcgtggtgtcgccgttgattgcgctg
atgcacgaccaggtgggggccttgcacgaagcgggggtggatgctgcgtttctcaactcc
acgctcgacttcgatgccacccaggatgtggaatggcggctgcagacgggccagatcacg
ctgctgtatgccgcacccgagcggctgaacacgccgcgctttctgggcctgctcgacagc
ctgtacgacagcggcaacctgtcgctgtttgccattgatgaagcgcattgcgtgagccaa
tgggggcacgacttccgccctgagtaccgggcgctgacgctgctgcacgagcgctacccg
cgggtgccgcggattgccctgacggccacggccgatgccctcacgcgcgaagacatcatc
gaacggctgcagctgcaggacgcgcgcctcttcatcagcagctttgaccgccccaacatc
cgctacaccatcgtcgagaaaaaagatgccaccacgcagctgctgcgctttatcgagcgc
gagcatgcaggggaggccggtgtggtgtattgccagtcgcgcaagcgggtggaggaactg
gccgccacgctcagcgatgcaggcatcaacgccctgccctaccacgccgggctggacagc
aaggtgcgccagaaccaccaggaccgcttcctgcgcgaggaaggcatcgtgatggtggcc
acgattgcgtttggcatgggcatcgacaagcccgacgtgcgctttgtggcgcatgtggac
atgcccaagaacatcgaaggctactaccaggaaaccggccgcgccgggcgcgacggcctg
cccgcccatgcgtggatggcctatggcctgcaggatgtgatgaaccagcgccgcatgatt
gacgaaagcccggcggccgaggagttcaaacaagccctgcgcggcaagctcgatgccctg
ctggccctggccgaggccaccgactgccgccgcgtgcggctgttggcctactttggcgag
gcctccacgccctgcggcaattgcgacaactgcctgaacccgcccgccgtgtgggatgcc
accgacgccgcgcgcaagctgctgtccaccatctaccgcgtgcaccaggccagcggcatc
ggctttggtgcggggcacatcatggacatcctgcgcggcaaaaagaccgacaaggtggca
cagttcgggcacgacaagctctccacctttggcattggcgcagacctgaccgagccccag
ctgcgcggcgtgctgcgccagttgctggccactggggccgtcggcctgcagaaggtgatg
ctggacagcggcatgagttttgacacgctgtgcctcaccgacggctcacgcgccgtactg
aagggcgaggtgcccgtgcaactgcgcgaatccgtcaccgccgctgcgcccaaacgcacc
cgcaagagcagcgcaccccccgccgctgcggccaacctggggcccgatgcccaggcacgc
ttcatcaacctcaaggcctggcgcgccgaagtggcgcgagaacacaacctgcccgcctac
gtcatcttccacgacgccaccctggccgccattgccgaccgcaaccccgcatcgctggac
gacctgcagggcatcagcggcatgggggccaagaagctggaggcgtatggggcggaggtg
ttgagggtgtgcgcgcaaaccgcatga
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