Acidovorax sp. DW039: ACDW_06520
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Entry
ACDW_06520 CDS
T10243
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
aciq Acidovorax sp. DW039
Pathway
aciq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aciq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACDW_06520 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aciq03400
]
ACDW_06520 (ruvB)
Enzymes [BR:
aciq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACDW_06520 (ruvB)
DNA repair and recombination proteins [BR:
aciq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACDW_06520 (ruvB)
RecFOR pathway proteins
ACDW_06520 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
nSTAND3
AAA_14
AAA_22
AAA_3
Rad17
AAA_18
NTPase_1
RNA_helicase
DUF815
TsaE
AAA_33
AAA_17
ABC_tran
AAA_28
Sigma54_activ_2
AAA_24
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BEU94947
LinkDB
All DBs
Position
734196..735272
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AA seq
358 aa
AA seq
DB search
MTIHTDDFAPVPAKRVVSAAPSSPQEEALERALRPKLLQEYVGQAKAREQLEIFIGAARK
RGEALDHVLLFGPPGLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDLAALLTNLEKNDVL
FIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNP
LRDRFGIVARLEFYTPDELARIVQRSAGLLGAPMDEEGGYEIARRSRGTPRIANRLLRRV
RDYAEVKGDGRITADIANRALAMLDVDPQGFDVMDRKLLEAVVHRFDGGPVGLDNIAASI
GEESGTIEDVIEPYLIQQGYLQRTPRGRIATLAAFRHLGVTPPAAGGFGLFDGAPGAV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccacaccgacgactttgccccagttcccgccaagcgcgtggtgtcggcggct
ccctcctccccgcaggaggaggcgctggagcgcgctctgcgccccaagctgctgcaggaa
tacgtcggtcaggccaaggcacgggagcaactggaaattttcatcggcgctgcccgcaag
cgcggcgaggcgctggaccatgtgctcttgttcggcccgcccgggctgggcaagaccacg
ctcagtcacatcatcgcggcagagctgggggtcaacctgcggcagaccagcggcccggtg
ctggagaaacccaaggacctggcggccttgctgaccaacctggagaagaacgacgttctt
ttcattgacgagatccatcgcctgtcgcccgtggtcgaggaaatcctctaccccgcgctg
gaggattaccagatcgacatcatgatcggggaaggcccggcggctcgcagcatcaagctg
gaccttcagcctttcaccctcgtcggtgcaaccacgcgtgcgggcatgctcactaacccg
ctgcgcgatcgctttggcatcgtggcgcggttagagttctataccccggatgaactggca
cgtatcgtccagcgcagcgcggggctgctgggggctcccatggacgaagagggcggttat
gaaattgcccgccgttcccgggggaccccacgtatcgccaaccgcctgctgcgccgtgtg
cgcgactatgcagaggtcaagggcgacggtcgcattaccgcagacattgccaaccgggcc
ctggccatgctcgacgtggacccccagggttttgatgtgatggaccgcaagctgctggag
gccgtggtgcaccggtttgacggtggtccggtgggcctcgacaacattgccgccagcatt
ggcgaagagtcgggcacgatcgaagatgtgattgagccctatctgatccagcagggttac
ctgcaacgcacgccgcgtggccggattgctacgctggcagcgttcaggcacctgggggtg
acaccacctgcagccgggggcttcggcctgtttgacggtgctcccggggctgtttga
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