Acidovorax sp. DW039: ACDW_08220
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Entry
ACDW_08220 CDS
T10243
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
aciq Acidovorax sp. DW039
Pathway
aciq00300
Lysine biosynthesis
aciq00470
D-Amino acid metabolism
aciq01100
Metabolic pathways
aciq01110
Biosynthesis of secondary metabolites
aciq01120
Microbial metabolism in diverse environments
aciq01230
Biosynthesis of amino acids
Module
aciq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
aciq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACDW_08220 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACDW_08220 (dapF)
Enzymes [BR:
aciq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACDW_08220 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BEU95117
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Position
918365..919243
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AA seq
292 aa
AA seq
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MQIRFTKMQGAGNDFVVLDETQGRLGLTTAHYRYLADRHFGVGADQILTVRPSPAEGIDF
EYVIHNADGGEVEQCGNGSRCFARYVRDKGLTDKDTIRVQTLSGVIAPRLTPDGRVAVDM
GRPVLEPARVPFDTAGLEPVAQGAGQKWPLALDVPAQPATVFVAVVSMGNPHAVQLVDDV
DTAPVAIWGPLVERHVRFPQRVNAGFMQVVSRTHVRLRVFERGTGETLACGTGACAAVAA
GIRLGLLDNEVHVDMRGGRLTIAWSGQETDTLYMTGPATTVFEGQIDIPDTL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcgctttaccaaaatgcagggcgcaggcaacgactttgtcgtgctggacgaa
acccagggccgcctgggtcttacgactgcgcactaccgctacctggccgaccgccacttt
ggcgtgggggccgatcagatcctcaccgtgcgtccctcgcccgccgaggggattgatttt
gagtacgtgatccacaacgctgacggtggcgaagtggagcagtgcggcaacggctcgcgc
tgctttgcgcgctacgtgcgcgacaagggcctgacggacaaggacaccatccgggtgcaa
acgctcagcggggtcattgcgccccgcctcacgcccgatgggcgggtggcggtggacatg
ggccgcccggtgctggagcccgcgcgggtgccgttcgacactgcgggactggagcctgtg
gcgcaaggtgctgggcaaaaatggccgctagcgctggatgtaccagcgcagccagctacg
gtttttgtagcggtggtgtccatgggcaatccgcatgcggtgcagttggtcgacgatgtg
gatacggccccggtggccatctggggcccgttggtggagcggcatgtgcgctttccgcag
cgggtgaatgcgggcttcatgcaggtggtaagccgcacccatgtgcgcctgcgcgtgttc
gagcgtggcacgggcgagacgctggcctgcggcacgggtgcatgcgctgccgtggcggct
ggcatccgcctggggctgctcgacaacgaagtgcatgtggacatgcgcggtggccgcctc
acgattgcctggagcggtcaggagaccgacaccctgtacatgaccggcccggccaccacc
gtgtttgaaggccagatcgatattccggacaccctatga
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