Acidovorax sp. DW039: ACDW_12580
Help
Entry
ACDW_12580 CDS
T10243
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aciq Acidovorax sp. DW039
Pathway
aciq03030
DNA replication
aciq03410
Base excision repair
aciq03420
Nucleotide excision repair
aciq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aciq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACDW_12580 (polA)
03410 Base excision repair
ACDW_12580 (polA)
03420 Nucleotide excision repair
ACDW_12580 (polA)
03440 Homologous recombination
ACDW_12580 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aciq03032
]
ACDW_12580 (polA)
03400 DNA repair and recombination proteins [BR:
aciq03400
]
ACDW_12580 (polA)
Enzymes [BR:
aciq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACDW_12580 (polA)
DNA replication proteins [BR:
aciq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACDW_12580 (polA)
DNA repair and recombination proteins [BR:
aciq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACDW_12580 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACDW_12580 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
WHD_SSO1393
Motif
Other DBs
NCBI-ProteinID:
BEU95553
LinkDB
All DBs
Position
1395003..1397801
Genome browser
AA seq
932 aa
AA seq
DB search
MTDKKTLVLVDGSSYLYRAFHAMPDLRAVPGDPTSPATGAIRGMINMMQALRKEVTADYA
VCVFDASGPTFRDALYTEYKATRSPMPDDLRSQIEPIHQVVDLLGWKVVAVPGVEADDVI
ATLAHTAAAQGIEVIVSSGDKDLSQLVNEHITIIDTMSGKRRDVAGVTAEFGVPPALMVD
YQALVGDTVDNVPGVTKVGPKTAAKWLEEYGSLDNLIANADAIKGVAGNNLREAIASGQL
ALSRQLVTMKTDCALADYIPGLPAFDDITLDAPDNEGLLPFYEKYGFKGLAAAIKGASAP
AATTPTVAMPGQSGDLFADHSASTVAEEAQHRTVVYDTILNWADFDQWLERLHKAPLTAI
DTETDSLDEMRAQIVGISFSVQPGEAAYIPLRHEGPDAPAQLPLDEVLARLKPWLQDPKH
PKLGQHIKYDRHVFANHGIEVQGYTHDTMLQSYVLEVHKPHNLTSLAERHTGRKGISYED
LCGKGAHQIPFAQVPVDKAAAYSCEDSDQTLDVHNALWPLLQADDKLRFIYELEIASSEA
LYRIERNGVLIDAPTLAAQSHELGQRILQLETEAYEIAGQPFNLSSPKQLGEIFFDKLGM
PVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLVKLKGTYTDKLAQLALPRTGRVH
THYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPVGRVIASADYSQIELRIMAH
LSGDHSLLHAFHAGLDVHRATAAEVFGVEVDQVTSEQRRYAKVINFGLIYGMSSFGLAKN
LGIETKAAAAYIDKYFQRYPGVKQYMDDTKAAAKSMGYVETVFGRRLYLPEINSPNGPRR
AGAERAAINAPMQGTAADLIKLAMVAVQKELDAHKPEIKMIMQVHDELVFELPESEVDWL
KTHIPRLMAEVAALKVPLLAEVGVGANWDKAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaaagaccctggtgctggtggacggctccagctacctctaccgcgccttc
catgccatgcccgacctgcgggccgtgccgggcgaccctacgagcccagccaccggtgcc
atccgcggcatgatcaacatgatgcaggccctgcgcaaagaggtgaccgccgactacgcc
gtgtgcgtgttcgacgccagcggccccaccttccgcgacgcgctgtacaccgaatacaag
gccacgcgctcgcccatgcccgacgacctgcgcagccagatcgagcccatccaccaggtg
gtggacctgctgggctggaaggtggtggccgtgcccggcgtggaggccgacgacgttatc
gccaccctggcccacacggccgcagcgcagggcattgaagttatcgtgtccagcggcgac
aaagacctgagccaactggtcaacgagcacatcaccatcatcgacaccatgagcggcaag
cgccgcgatgtggcgggcgtgacggccgagtttggcgtgccccctgcgctgatggtggac
taccaggccctggtgggcgacaccgtggacaacgtgcccggcgtgaccaaggtagggccc
aaaaccgccgccaagtggctggaagaatacggctcgctcgacaacctgattgccaacgcc
gacgccatcaagggcgtggcgggcaacaacctgcgcgaggccattgccagcggccaactg
gccctgagccgccagctcgtcaccatgaagaccgactgcgcactggccgactacatcccc
ggcctgcccgcgtttgatgacatcacgctcgatgcgcccgacaacgagggcctgctgccg
ttttacgaaaagtacggcttcaagggcctggccgccgccataaaaggtgcatcggctcca
gcggctaccacccccaccgtcgccatgcccggccaaagcggcgatttgtttgccgaccac
tccgctagcaccgtggccgaagaagcccagcaccgcacggtggtgtacgacaccatcctc
aactgggccgactttgaccagtggctggagcgcctgcacaaagccccgctcacggccatc
gacaccgagaccgactccctcgacgaaatgcgcgcccaaatcgtcggcatctctttcagc
gtgcagcccggcgaagccgcctacatccccctgcgccacgaaggccccgatgcccccgcg
caactgccgctggatgaagtgctcgcccgcctcaagccctggctgcaagaccccaagcac
cccaagctgggtcagcacatcaaatacgaccgccatgtgttcgccaaccacggcatcgag
gtgcagggctacacacacgacaccatgctgcaaagctacgtgctcgaagtgcataagccc
cacaacctgaccagcctggctgagcgccacaccggccgcaaaggcatcagctacgaagac
ctgtgcggcaaaggcgcgcaccagatcccgtttgcgcaagtgccggtagacaaggccgcc
gcctactcgtgcgaagactccgaccagaccctggacgtacacaacgccctgtggcccctg
ctgcaggcggacgacaaactgcgctttatctacgagctggagatcgccagcagcgaggcc
ctgtaccgcatcgaacgcaacggcgtgctgattgacgcacccacgctggccgcccaaagc
cacgagctgggccagcgcatcctgcagcttgaaaccgaggcgtatgagattgcaggccag
cccttcaacctgagcagccccaagcagctgggcgaaatcttcttcgacaagctgggcatg
cccgtggtgaagaagaccgccaccggtgcccgcagcaccgacgaagaagtgctggaaaag
ctggccgaggactaccccctgcccgccaagctgctggagcaccgcagcctcgtcaagctc
aaaggcacctacaccgacaagctcgcccaactggccctgccacgcaccggccgcgtgcac
acgcactacgcgcaggccgtggccgtcacaggccgcttgtccagcaacgaccccaacctg
cagaacatccccatccgcacccccgaaggccgccgcgtacgcgaagcctttgtggccccc
gtaggccgggtgattgcgagtgccgactactcccagatcgagctgcgcatcatggcccac
ctgagcggcgaccactcgctgctgcacgccttccacgccgggctggacgtgcaccgtgcc
accgccgccgaagtgtttggcgtggaggtcgatcaggtcaccagcgagcaacgccgctac
gccaaggtcatcaactttggcctcatctatggcatgagcagctttggcctagccaaaaac
ctgggcatcgagaccaaggccgcagccgcctacatcgacaagtacttccagcgctatccc
ggcgtgaagcagtacatggacgacaccaaggccgccgccaaatccatgggctatgtcgaa
accgtgtttggccgccgcctgtacctgcccgaaatcaactcccccaacggcccccgccgc
gcaggggccgaacgtgccgccatcaacgcaccgatgcagggcacggccgctgacctcatc
aagctggccatggtggccgtgcaaaaggagctggacgcccacaagccggagatcaagatg
atcatgcaggtacacgacgaactggtgttcgagctgcccgagagcgaggtggactggctc
aagacccacatcccgcgcctgatggcggaggtggcggcgctgaaggtgccgttattggcg
gaggtgggggtgggggctaattgggataaggcgcactaa
DBGET
integrated database retrieval system
