Acidovorax sp. DW039: ACDW_13180
Help
Entry
ACDW_13180 CDS
T10243
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aciq Acidovorax sp. DW039
Pathway
aciq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aciq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACDW_13180 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aciq03400
]
ACDW_13180 (mutM)
Enzymes [BR:
aciq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ACDW_13180 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ACDW_13180 (mutM)
DNA repair and recombination proteins [BR:
aciq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACDW_13180 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
BEU95613
LinkDB
All DBs
Position
1460343..1461158
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVEVTRRSFADAIAGARVHGVYLGKPLRWPLGCDPRTLEGMTITEVRRRGKYLLI
GLDSGAMLLVHLGMSGSLRFALALPEKGKHDHFELQTSKGVLRLHDPRRFGAVIYVAGET
DPVARKLLGGLGMEPLSDAFTMERFRQGLKSSRSDIKQLLLAGKLVVGVGNIYASEALFR
AGISPTVKASLIGLERSSRLFHAIREVLSEAVNMGGSSLKDFSSADGTEGHFQTAAKVYG
RSLQPCLQCETPIRMLRQGQRSSFYCPRCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcctgaggtagaggtcacacgccgtagctttgccgatgccattgctggt
gcacgcgtgcacggcgtctatcttgggaaaccgctgcgctggccactgggttgcgatcca
cggacgctggagggaatgaccatcaccgaggtccggcgtcggggaaagtacttgctgatt
ggtctggacagcggtgctatgttgctcgtgcatctggggatgtcgggcagtttgcggttt
gccttggctctgccggagaagggtaagcacgatcacttcgaattgcagacatctaaaggg
gtgcttcgattgcatgatccacgccgctttggtgcggtgatctatgtcgcaggagagacg
gatcctgtggctcgcaagctgctcggcgggctgggtatggagcctttgagtgatgccttc
acgatggagcgctttcggcaggggctcaagagcagtcggtcggatatcaaacagttgctc
ttggccggcaaactggtagtgggcgtagggaacatatacgcctcggaagccttgttcaga
gcgggtatcagccccaccgttaaagcttctctgatcggcttggaaaggagctctcggctt
ttccatgccattcgtgaggtattgagcgaagccgtgaacatgggtggctccagcctgaaa
gatttctccagtgctgacggaaccgaaggtcattttcagactgctgcaaaagtctacgga
cggtcgctgcagccttgcctgcagtgtgaaacacctattcggatgctgaggcaagggcag
cgcagcagtttttattgtccgcgctgccagcgctag
DBGET
integrated database retrieval system
