Acidovorax sp. DW039: ACDW_14580
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Entry
ACDW_14580 CDS
T10243
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aciq Acidovorax sp. DW039
Pathway
aciq03420
Nucleotide excision repair
aciq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aciq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACDW_14580
03430 Mismatch repair
ACDW_14580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aciq03400
]
ACDW_14580
Enzymes [BR:
aciq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACDW_14580
DNA repair and recombination proteins [BR:
aciq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACDW_14580
MMR (mismatch excision repair)
Other MMR factors
ACDW_14580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BEU95753
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Position
1621604..1624123
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AA seq
839 aa
AA seq
DB search
MFPQDLFSGAPDEPVPPSAAAPFNPSSGAPMHATAHASMNSPLLVGLNEEQLAAVTLPAG
HALILAGAGSGKTRVLTTRIAWLLQHGHVTPGGILAVTFTNKAAKEMVARLTAMLPVNVR
GMWIGTFHGLCNRLLRAHHKAAGLPQAFQILDTQDQLSAIKRLCKQFNVDEERFPPKQLA
YFIAGCKEEGMRPGDVPAHDADGRKKIELYLLYEEQCQREGVVDFGELMLRSYELLRDND
PIREHYQRRFRHILVDEFQDTNRLQYLWLKQMAGDEVAGRLQSQGSVMAVGDDDQSIYAF
RGARVGNMADFVREFDVQHQIKLEQNYRSYSNILDSANHLISHNSRRLGKNLRTTQGAGE
PVRVYEATTDLAEAQWMVDEIKQLVRSDGFERKEIAVLYRSNAQSRVIESALFNASVPYR
VYGGLRFFERAEIKHALAYLRLLENPHDDTSFLRVVNFPPRGIGARSIEVLQDAARAAGC
SLHDAVSAVPGKAGTNFKAFVAMIDVLREQTEGRSLRGIIEQMLESSGLVEHFRTEKEGA
DRIENLQELVNAAESFVTQEGFGRDAVALPLDEHGQPLTQSAVSQGLDPNAPVLDEPLKP
ANSANPTNPAGIIDADTGETLSPLVAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEF
DGVFIGGLEEGLFPHDNSSSDRDGLEEERRLMYVAITRARKRLYLSHSQTRMLHGQTRYN
VKSRFFDELPEACLKWITPKQQGFGSFAPNSGAVSAYQSGARGSFGFKSETFASPPVPPQ
KAAPSHGLRAGTAVFHTKFGEGKVLAIEGTGDDARAQVNFPRHGTKWLALSVAKLTVVD
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgttcccacaagatctgttttccggggcacccgatgagccggtgcccccatccgctgct
gcgcccttcaatccatcttcgggtgcgccgatgcacgctactgcccacgcatccatgaac
tcgcccctgttggttggtctgaacgaagaacaactcgccgcagtcaccctgcccgcaggc
cacgcactcatcctggcgggcgcgggctcgggcaagacgcgtgtgctcaccacccgcatt
gcgtggctgctgcagcatggccacgtcacgcccggtggcatcctggccgtcacctttacg
aacaaggccgccaaggagatggtggcgcgcctcaccgccatgctgccggtgaacgtgcgc
ggcatgtggatcggcaccttccatggcctgtgcaaccgccttttgcgcgcacaccacaag
gctgcgggcctgccgcaggcgttccagattctggacacgcaagaccagctctcggccatc
aagcggctgtgcaagcagttcaatgtggatgaagagcgctttccgcccaagcagctggct
tacttcattgcgggctgcaaagaagagggcatgcgccccggcgatgtgcccgcgcacgat
gccgatggccgcaagaagatcgagctttacctgctgtacgaagagcagtgccagcgcgaa
ggggttgtggactttggcgaactgatgctgcgctcttatgagctgctgcgcgacaacgat
ccgattcgcgagcactaccagcggcgcttccgccacatcctggttgatgagtttcaggac
accaaccgcctgcagtacctgtggctcaagcagatggccggcgacgaggtggcgggccgc
ctgcaaagccagggtagcgtgatggccgtgggcgatgacgaccagagcatctacgccttt
cgcggcgcacgcgtgggcaacatggccgactttgtgcgcgagtttgacgtgcagcaccag
atcaagctggagcagaactaccgcagctacagcaacatcctcgactccgccaaccacctc
atcagccacaacagccgccgcctgggcaaaaacctgcgcaccacgcagggcgcgggcgaa
cctgtgcgcgtgtatgaagccaccaccgacctggccgaggcgcagtggatggtcgatgag
atcaagcaactggtgcgcagcgacggttttgagcgcaaagagattgccgtgctctaccgc
agcaacgcgcaaagccgggtgatcgaatcggcgctgttcaatgcgtcagtgccctaccgc
gtgtatggcggcctgcgcttttttgagcgcgccgaaatcaagcacgcactggcctacctg
cgcctgctagagaacccgcacgacgacacgagctttctgcgcgtcgtcaacttcccgccg
cgcggcattggggcacgcagcattgaagtgctgcaggacgccgcccgcgccgcaggctgc
tcgctgcacgatgccgtgagcgccgtgcccggcaaggctggcaccaacttcaaggccttc
gtcgccatgatcgacgtgctgcgcgagcagaccgagggccggtcgctgcggggcatcatc
gagcagatgctcgaatccagcgggctggtggagcacttccgcaccgaaaaagaaggcgct
gaccgcattgagaacttgcaggaactggtgaacgccgccgagagcttcgtcacacaagaa
ggctttggccgcgatgccgtggccctgccgctggatgagcatggtcagccgctcacgcag
agtgccgtcagccaaggcctggacccgaacgccccggtgctggatgagccgctcaagccc
gctaactctgccaaccccaccaaccccgcaggcatcatcgacgcagacacgggcgaaacc
ctctcgccgctggtcgccttcctcacccacgccgcgctggaagctggcgacaaccaggcc
caggcagggcaagacgccgtgcagctcatgaccgtgcacgccagcaaggggctggagttt
gacggcgtgttcatcggcggcctggaagagggcctgttcccgcacgacaactcttccagc
gaccgcgatgggctggaggaagagcgccgcctgatgtacgtggccatcacccgcgcccgc
aaacgcctgtacctcagccattcgcaaacgcgcatgctgcacggccagacgcgctacaac
gtcaagagccgcttttttgacgaactgcccgaagcgtgcctcaaatggatcacgcccaag
cagcaaggctttggctcgtttgctcccaattcaggagctgttagcgcttaccagtcgggc
gctagaggctcatttggcttcaaatctgaaacctttgccagcccacccgtacctccacaa
aaggccgcgccctcgcacgggctgcgcgcaggcaccgctgtgttccacaccaagtttggc
gaaggcaaggtgctggccattgaaggcacgggcgacgacgcccgcgcccaggtcaacttc
ccccgccacggcaccaagtggctggcgctgagcgtggcgaaattgacagtggtggattga
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