Acidovorax sp. DW039: ACDW_21770
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Entry
ACDW_21770 CDS
T10243
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
aciq Acidovorax sp. DW039
Pathway
aciq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aciq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACDW_21770 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aciq03400
]
ACDW_21770 (uvrB)
DNA repair and recombination proteins [BR:
aciq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACDW_21770 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACDW_21770 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
AAA_22
AAA_16
AAA_25
Pyr_redox
FlaG
Motif
Other DBs
NCBI-ProteinID:
BEU96472
LinkDB
All DBs
Position
2468553..2470643
Genome browser
AA seq
696 aa
AA seq
DB search
MLELTEAMQPSQEGEFVRFPDSPFELFQPYPPAGDQPEAIAKLVEGLNDGEAFQTLLGVT
GSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSAINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGEPESYHRMVMTL
RVGDKLGQRDVIAQLIRMQYQRNEADFSRGKFRVRGDTIDVFPAEHSELAIRIELFDDEV
ESLQLFDPLTGRIRQKIPRFTVYPSSHYVTPRDKVLAAVETIKLELAERLQQLVADGKLV
EAQRLEQRTRFDLEMLSEVGHCKGIENYTRHLSGAAPGDPPSTLTDYMPKDALMFLDESH
QMIGQLSAMYNGDRARKTTLVEYGFRLPSALDNRPLKFEEFEQRMRQVIFVTATPADYEK
THSGQIVDQVVRPTGLVDPIVEVRPATHQVDDVLQEIRIRVERQERVLITTLTKRMAEQL
TDYLTDNGVKVRYLHSDVDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRAERSLIQTIGRAARNLNGHAILYADRITDSMKKAMDETERRRTKQLAHNEAH
GITPRGIVKRVRDLIDGVYSEKAGKDAERLEQEAMQRAQVEEMSEKDISREIKRLEKQML
EHARNLEFEQAARVRDQLTKLKDRAFGAPGGDSIAV
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgctggaattgactgaagccatgcagccctcgcaagagggcgagtttgttcgctttcct
gactcgccgttcgagctgttccagccgtacccgcccgcaggcgaccagccggaggccatt
gccaagctggtggaagggctcaacgatggagaggccttccagaccctgctgggcgtgacc
ggctctggcaaaaccttcacgatggcgaatgtgatcgcccgcatgggccgccccgccatc
gtttttgcgcccaacaagacattggcggcgcagctttacagcgagtttcgggagttcttt
ccgaaaaatgcggtggagtactttgtcagctactacgactactaccagcctgaggcgtat
gttccccagcgcgacctgttcatcgagaaggacagcgccatcaatgagcacatcgaacag
atgcggctgtcatgcaccaaaagcctgatggagcggcgcgacgtggtgattgttgccacg
gtgtcggccatctacggcattggtgagcctgaaagctatcaccgcatggtgatgaccctg
cgtgtgggggacaagctgggtcagcgggatgtgatcgcccagctcatccgcatgcaatac
cagcgcaacgaggccgatttttcgcgtggcaagttccgggtgcggggagacaccattgat
gtcttcccggctgaacactctgagctggccatccgcatcgagttgtttgacgacgaggtg
gagagcctgcagctgtttgatcctctcacaggccgcattcgtcagaagattccgcgcttt
accgtatatcccagcagccactacgtgaccccgcgcgacaaggtgctggctgcggtagag
accatcaagctggagctggccgagcggctgcagcaactggtggccgatggcaagctggtg
gaggcgcagaggctggagcagcgtacgagatttgatctggagatgctcagcgaagtgggg
cactgcaaggggatcgaaaactacacgcggcacctttcgggcgcagcccccggcgatccg
cccagcaccctgacggactacatgcccaaggacgcgctgatgtttctggacgaaagccac
cagatgattggccagctctcagccatgtacaacggggaccgtgcgcgcaagacaacgctg
gtggagtacggctttcgccttccatctgcattggataaccggcccctcaaatttgaagag
tttgagcagcgcatgcggcaggtcatctttgtcacggccacgcctgctgactatgaaaaa
acgcattcgggccagatcgtggatcaggtggttcgcccgaccggcttggtggacccgatc
gtcgaagtacgacccgccacccaccaggtggacgatgttctgcaggagatccgcatccgt
gtcgagcggcaggagcgggtgctgatcactactttgaccaaacgcatggcggagcaattg
accgattacctcaccgacaacggggtgaaggtgcgttacctgcacagcgatgtggacacc
gtggaacgggtggagatcatccgtgacctgcgccttggtgccttcgacgttctggtcgga
atcaacctgctgcgggaggggttggatattccggaagtctcgctggttgccattctggat
gccgacaaagagggcttcttgcgtgccgagcgcagcctgatccagacgattggccgtgct
gcgcggaacctgaatggtcacgccattctgtacgctgaccgtattacggattccatgaaa
aaagccatggatgagacggagcggcggcgcaccaagcagcttgcgcacaacgaggcgcat
ggcattaccccgcgcggcattgtcaagagggtacgagacctgattgacggtgtttacagc
gagaaagcgggtaaagacgctgagcggctggagcaagaagccatgcagcgagcccaggtg
gaggagatgtctgaaaaagacatctcgcgcgaaatcaagcgccttgaaaagcagatgctg
gagcatgcccgcaacctggaattcgagcaggccgcccgtgtacgcgatcagctgaccaaa
ctcaaagaccgcgcctttggtgcacccgggggggattccatcgctgtctag
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