Acidovorax sp. DW039: ACDW_28980
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Entry
ACDW_28980 CDS
T10243
Name
(GenBank) DEAD/DEAH box helicase
Organism
aciq Acidovorax sp. DW039
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
BEU97193
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Position
complement(3274296..3277862)
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AA seq
1188 aa
AA seq
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MSETFWFDPESLHALCEDGPWMRGKALLAQGTVGMPQLQAVEEGWHLQGVVHGAQQPPYA
VAVTMAVMPDGQVDYWRGTCECPVGRQCKHAVALMLKAARLPVSEQVRAASAPRKPSAAV
ASHSVRERMAAVQQAEAQAQLINWLQALDAAGGEGRTTPVDPAVRPEQYLYLVSVVGALR
QPPQLQLEAVVSYPKVTGGWAKPKQVRTQPARGQAVYDQASDTDREVLQLLRAMPRSQTY
YSAYSGAPCAVLEGPVGVLALQQAASTGRLFADAGGSTVGEPMQWGAARPLQWQWHEVPA
PAGALVDEPAWQLRATLAGGTGTLCHNSPPLFVDVEQGACGPVDIGPLSPAQLEVLLKAP
ALKVSALQKHQDELVRSLPGVPLPPVVQALARIDGVVPQPCLHLDRVPAAERMQRGLLAA
RLTFNYQGCRGWWPGQGAAVVVEAEDSGQGTRVLLQRDMRAELAAVEALSRLGLLATDDG
RFGLSGGQSQQPWLQWADDGFAVFSALGFEVTQAPSLQGWVAHGQAVTVDWSAAGSAAAA
ANGPLGDGGADQPVPRLAVAPGSAMAADTADGEVSPWFSLSLGVEVDGQRHNVLPWLPDL
IAQAAQQPLDPATGQPQLPPYVYVPRGGAEGDAGDGFIRLPTGPLRPWLAALLELAGERR
GDFAQGSLRLSRMEALRASAALGEGVAWSGLETLRNLLGVLNGSVPMTDVPVPASVQAAL
RPYQQQGLNWLQFLRAHGLGGILADDMGLGKTLQTLVHIQVEKDAGRLTAPALVIAPVSL
MGNWHSEAQRFCPGLRTLVLHGKDRHDHEASVGAHDLVIAPYSLLQRDRERWLQEPWHLV
VLDEAQNIKNASTNAAQVVSSLQARHRLCLSGTPMENHLGEIWSLFHFLMPGFLGSQQRF
RELFRHPIEKQGDSGRLAQLRARIAPFMLRRTKDLVAAELPPKVETVMRVELTGAQADLY
ETIRLGTEKAVREALSSRGLAKSHITILDALLKLRQVCCDPHLVPLEAARQVQESAKLAQ
LMELLPEMLAEGRRVLVFSQFTSMLGLIEAELKARGLTWVKLTGQSQKREEIIGRFTRGE
VPLFLISLKAGGVGLNLPQADTVIHYDPWWNPAAEAQATDRAHRIGQMQSVWVVKMVAQG
TIEERILALQERKAQLAASVYGADATRREALLTEADLQELLLPLGALE
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaccttctggttcgaccccgaatccttgcacgccctgtgcgaggacggcccc
tggatgcggggcaaggcattgctggcccagggcaccgtgggcatgccgcagttgcaggcg
gtggaagaaggctggcatctgcagggcgttgtgcatggggctcagcagcccccttatgcc
gttgccgtcaccatggcggtgatgcccgatggccaggtggactactggcggggaacctgc
gagtgcccggtgggccgccagtgcaagcatgccgtggcccttatgctgaaagccgcgcgc
ctgcctgtcagtgagcaggtgcgtgccgccagcgccccgcgcaagcccagcgccgcagtg
gcttctcattcggtgcgcgagcgtatggccgccgtgcagcaggccgaagcccaggcacag
ctcatcaactggcttcaggccctggatgcggcgggaggggaggggcggaccacaccggta
gaccctgcagtgcggccggaacagtatctgtacttggtgtctgtggtgggggccttgcgc
cagccgccgcaattgcagctggaggctgtggtctcgtatcccaaggtcacgggcgggtgg
gccaaacccaagcaggtgcgcacccagccagccagagggcaggcggtgtatgaccaggcc
agcgataccgaccgcgaagtgctgcaactgctgcgcgccatgccgcgcagccagacctat
tactcggcctacagtggcgccccctgtgccgtgctggaaggcccggtgggcgtgcttgct
ctgcagcaggccgcctccacaggccgtctttttgcggatgccggtggaagcacggtgggt
gagccgatgcaatggggcgcggcccgccccctgcaatggcagtggcacgaagtaccggca
cctgccggggcgctggtagatgagcccgcatggcagctgcgtgccacattggcgggcggc
acgggaaccctgtgccacaacagcccgcccttgtttgtggatgtggagcagggcgcgtgc
gggcctgtggacattggccccctcagtccggcccagctggaggtgttgctcaaggcccct
gcgctcaaggtttctgccctgcaaaaacaccaggacgagctggtccgcagcctgcctggc
gtgcccttgcccccggtggtccaggcactggcccgcattgacggggtggtgccccagcct
tgcctgcatctggaccgggtgcctgcggcagagcgcatgcaacgggggctgctggctgcg
cgcctcaccttcaattaccagggctgccgcggctggtggccggggcagggcgctgccgtg
gtggtggaggctgaagactcgggtcagggtacgcgtgtgctgctgcaacgcgacatgcgg
gccgagctggcggcggtagaggctttgtcccgcctgggtttgctggccactgacgatggt
cggtttggcctgtccggtgggcaatcgcagcagccgtggctgcaatgggcggatgacggc
tttgcggtgttcagcgcactggggtttgaggttacccaggccccgtcgctgcagggctgg
gtggcccatgggcaggcggtcactgtcgattggtctgcggcaggcagtgctgctgcagcg
gccaatggtccgctgggcgatgggggggcagatcagccggttccccgcttggcggtcgcg
cccggcagcgcgatggctgcggacacagcagatggggaggtatcaccctggttttcgctg
tcgctgggcgtggaggtggacggccagcgccacaacgtgctgccctggctgcccgacctg
atagcccaggccgcccagcagccgctggaccctgcaacaggccagccccagttgccgccc
tatgtgtatgtgccacggggcggcgctgagggcgatgccggggacgggtttatccgcctg
cccaccgggcccctgcgtccctggctggccgctttgctggaactggccggagagcgccgt
ggcgacttcgcacagggcagcctgcgcttgtcgcgcatggaggccttgcgtgccagcgcc
gcgctgggcgagggcgtggcatggagcgggctggaaacattgcggaatttgctgggagtg
ctgaacggcagcgtgcccatgaccgatgtgcccgtgcctgccagcgtgcaggccgcgctg
cgcccttatcagcagcaaggcctgaactggctgcagtttttgcgcgcccatggtctgggg
ggcatcctggcagacgacatggggctgggtaaaacgctgcagacactggtgcacatccag
gtcgaaaaagatgcaggccgcctcacggctcccgcgctggtcattgcgcccgtcagcctg
atgggcaactggcacagcgaggcgcagcggttttgcccagggctgcgcaccctggtgctg
cacggcaaggaccggcacgaccacgaagcatcggtgggcgcacacgatctggtgattgcc
ccttattcactgctgcagcgcgaccgggagcgctggctgcaggagccctggcatctggtg
gtgctggacgaagcgcagaacatcaagaacgccagcaccaacgcggctcaggtggtatcg
agcctgcaggcgcggcaccggctgtgtctgtcaggcacccccatggaaaaccacctgggc
gaaatctggagcttgttccattttttgatgcccggatttctgggcagccagcagcgtttt
cgcgaactgttccgccatccgattgaaaaacagggcgacagcggccgcctggcccagttg
cgggcacgcattgcacctttcatgctgcggcggaccaaggacctggtggcggcagaactg
ccacccaaggtggagaccgtgatgcgggtggagctgaccggtgcgcaggcggatctgtac
gaaaccattcgtctgggcaccgagaaggcggtgcgcgaggccttgagttccagggggcta
gccaagtcccacatcaccattctggatgcgctgctcaagctgaggcaggtgtgttgcgat
ccccatctggtgccattggaagccgcccggcaggtacaagaatccgccaagctggcccag
ttgatggagttactgcccgaaatgcttgccgaggggcggcgggtgctggtgttttcgcag
ttcaccagcatgctggggctgatcgaggcagagctgaaagccagaggcttgacctgggtc
aagctaacggggcagagccaaaagcgcgaagaaatcattggccgctttacccgcggcgag
gtgccgttgtttctcatcagcctgaaggcgggaggggtggggctgaacctgccccaggcc
gacacggtgatccactacgacccctggtggaaccccgctgcagaggcgcaggccacagac
cgcgcccaccgcatcggccagatgcagagcgtgtgggtggtcaaaatggtggcgcagggc
acgattgaagagcgtatcctggccctgcaagagcgcaaggcgcaactggccgcctcggtc
tacggggcggacgccacccgccgcgaggctttgttgacagaggcggacctgcaggagctt
ttactgcccttgggcgcacttgagtga
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