Acidovorax sp. DW039: ACDW_37090
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Entry
ACDW_37090 CDS
T10243
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
aciq Acidovorax sp. DW039
Pathway
aciq02020
Two-component system
aciq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aciq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACDW_37090
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACDW_37090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aciq03021
]
ACDW_37090
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
aciq02035
]
ACDW_37090
Transcription machinery [BR:
aciq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACDW_37090
Bacterial motility proteins [BR:
aciq02035
]
Flagellar system
Flagellar assembly proteins
Stator
ACDW_37090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GntR
UPF0122
GerE
CT_C_D
8xMP
Motif
Other DBs
NCBI-ProteinID:
BEU98004
LinkDB
All DBs
Position
4201558..4202274
Genome browser
AA seq
238 aa
AA seq
DB search
MYTAKGQLDRDAMIRQHVPLVRRIAHHMIAKLPPNVELDDLIQVGMMGLAEALSRYETAQ
GVQFETFATQRIRGAMLDELREGDWMSRSSRKSQKDIEHAVHRLEQRLGRSPLESEIAAE
MELSLADYQSLLSKVRGTQLVYLEDMTNGGDDEDGFLDRHVADAAADPVELLRDQRLRSS
LVNAIKSLPEREQHIMGMYYEHDMNLKEIAAVLGVTESRVCQLHSQSIARLRAKMRSH
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgccaaaggccagctcgatcgtgatgccatgatccgccagcacgtaccgctg
gtcaggaggattgcgcaccacatgattgccaagctgccgcccaatgtggagcttgacgac
ctgatccaggtcggcatgatgggcttggcagaggcactttcgcgttacgagaccgctcag
ggtgtgcagtttgagacctttgccacccagcgcatccgcggtgccatgctggatgagttg
cgcgagggtgactggatgtcgcgcagttcgcgcaagagccagaaagacatcgaacacgca
gtgcaccggctggagcagcgtctgggccgcagcccgctcgagtcagaaattgcagccgag
atggaactgagcctggcggattaccaaagcctgctgagcaaggtgcgcggcacgcaactg
gtgtacctggaggacatgaccaacggcggggacgatgaagacggttttctggaccgacac
gttgccgacgccgcagcggaccccgttgagctgctgcgcgaccagcgtcttcgcagctcc
ctggtcaatgccatcaagagcctgcccgaacgcgaacagcacatcatgggcatgtattac
gagcacgacatgaatctcaaggaaatcgctgccgtgctgggggtcaccgagtcacgggtg
tgtcagctgcacagccagtccatcgcccgcctgcgcgcgaagatgcgcagccactga
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