Acidovorax sp. DW039: ACDW_40370
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Entry
ACDW_40370 CDS
T10243
Name
(GenBank) TIGR03915 family putative DNA repair protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aciq Acidovorax sp. DW039
Pathway
aciq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aciq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACDW_40370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aciq03400
]
ACDW_40370
Enzymes [BR:
aciq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACDW_40370
DNA repair and recombination proteins [BR:
aciq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACDW_40370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
Motif
Other DBs
NCBI-ProteinID:
BEU98332
LinkDB
All DBs
Position
4568244..4569104
Genome browser
AA seq
286 aa
AA seq
DB search
MQRHTITLEHPTDWQGFRTAARALVQANVLPQAVDWRCQADAAEDLFAPEPHSHNALPPP
APDAPTLRVPPDFVHLCEQLILHRDPARFALMYRLLWRMAQGGTEAEAARHDPLDADRML
AHHMVRAVRRDMHKMHAFVRFRPVVEPDGETLHMAWFEPDHYITEANAGFFIRRFTQMRW
AILTPDASVRWDGRQLHTGPGAQRSDAPGPDAGEALWLTYYRHIFNPARLKLAMMKKEMP
TRYWHNLPEAALITELAQTAHERSAQMVAAEPTVPRRRIAGKPAQA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccacaccatcacgctggagcaccccaccgactggcaaggctttcgcaccgcc
gcacgcgccctggtgcaagccaatgtgctaccgcaagccgtggactggcgctgccaggcc
gatgcggctgaagacctgtttgcgccagagccccacagccacaacgccctgccaccgcca
gcccccgatgcgcccacgctgcgcgtgccacccgactttgtgcacctgtgcgagcagctc
atcctgcaccgcgacccggcccgctttgcactgatgtaccgcctgctgtggcgcatggcg
caaggcggcacggaggccgaagccgcgcggcacgacccgctggacgccgaccgcatgttg
gcccaccacatggtccgcgccgtgcggcgcgacatgcacaagatgcacgcctttgtgcgc
tttcggcccgtggtggagcccgatggcgagaccctgcacatggcctggttcgagcccgac
cactacatcaccgaggccaatgcgggcttcttcatccgccgcttcacgcagatgcgctgg
gccatcctcacgcccgacgccagcgtgcgctgggatgggcggcagctgcacaccggcccc
ggcgcgcagcgcagcgacgcgccggggcctgatgcgggcgaggccctgtggctcacctac
taccgccacatcttcaaccccgcgcggctcaagctggccatgatgaaaaaggagatgccc
acgcgctactggcacaacctgcccgaggccgcgctcattaccgaactggcgcagacagcg
cacgagcgcagcgcgcagatggtggcggccgagcccaccgtgccgcgcaggcgcattgca
ggcaagccagcgcaggcgtaa
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