Acidovorax sp. DW039: ACDW_40720
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Entry
ACDW_40720 CDS
T10243
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aciq Acidovorax sp. DW039
Pathway
aciq03420
Nucleotide excision repair
aciq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aciq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACDW_40720
03430 Mismatch repair
ACDW_40720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aciq03400
]
ACDW_40720
Enzymes [BR:
aciq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACDW_40720
DNA repair and recombination proteins [BR:
aciq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACDW_40720
MMR (mismatch excision repair)
Other MMR factors
ACDW_40720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BEU98367
LinkDB
All DBs
Position
complement(4603974..4605968)
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AA seq
664 aa
AA seq
DB search
MATVHPYQPKHITPTDEQVAVQMSAERTLIIEANAGAAKTTTLALRMAQAWMGGMPPERC
LALTYTDTACQALQAALRKIGLPAPVVARFRIASFDAFCTAMLQEPYVAPVEQLTDIEAL
RPYVWDAVQRVEASEHERWPEELQLPSAGDAGFIEDFLAMALWLKGTLKDDMEREDRPAS
PDYAGDLGVSYTLLKVFRAYERIRRRELAEQPLFRGPYDATYDLARRLLEGDTAASLPHW
PRNVQMLLVDEMHDVNAASFRVLRELLDSTLCQFCGVGDRDQVIFGAHGADAAYMGDAIA
THTSRRVVRLPLTPSHRFGRKLAAKAGRLAGKPYGSLAAHETAVQLLGYEDEAHCVDLIA
QQVQQWRTATRGKMAGLAVLLRHPGQSIAIENRLLADGVPYTVSGFESYLLRPEVLLVRG
LLAVATDNFDSVTEPRTREKLMRALVFFCGARIVVKGREHESQHELLEDAIRSVTDNPLF
LESFFTNQIVANVEPAMQRRLRNALKVAQEAQGPDTLARLLQALQIETVVREVFVSRQRR
ADALANLVGLSQAAQAFASARDYFLHLNAAEQRQRELRSTASLVLAHIGHVKGLEFEHVL
IPYLEQGAFPDPQAPQEQERNTLYVGMTRARQQLTLLAHQQRPSALVAQLGYAVAPPPQA
AKTA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaccgttcacccgtaccaacccaaacacatcacccccactgacgagcaggtcgcc
gtgcagatgtctgccgagcgcacgctcatcatcgaggccaacgccggtgccgccaaaacc
accacgctggcgctgcgcatggcccaggcgtggatggggggcatgccgcccgagcgctgc
ctggccctgacctacaccgacaccgcctgccaggccctgcaggccgcgctgcgcaagatc
gggttgcccgcgccagtggtggcgcgctttcgcattgccagctttgacgccttctgcacc
gccatgctgcaggagccctatgtggcccccgtggagcagctcaccgacatcgaggccctg
cgcccctacgtgtgggacgccgtgcagcgcgtggaggccagcgaacacgagcgctggccc
gaagagctgcaactgcccagtgcgggcgatgccgggtttatcgaagactttctggccatg
gcgctgtggctcaagggcacgctcaaggacgatatggagcgcgaagaccgccccgcatcg
cccgactacgcgggcgacctgggcgtgagctacaccctgctcaaggtgtttcgtgcgtat
gaacgcattcgccgccgcgagctggccgagcagccgctgtttcgcggcccgtacgatgcc
acctacgacctggcccgccgcctgctggagggcgacaccgccgccagcctgccgcactgg
ccgcgcaatgtgcagatgctgctggtggacgagatgcacgacgtgaacgcggcatcgttc
cgcgtgctgcgcgagctgctcgactccaccctgtgccagttctgcggcgtgggcgaccgc
gaccaagtgatcttcggcgcgcacggggctgatgccgcctacatgggcgatgcgattgcc
acgcacaccagccgccgcgtggtgcgcctgcccctcacccccagccaccgctttggccgc
aagctggccgccaaggccgggcggctggcaggcaagccctacggctcgctggccgcgcat
gaaaccgccgtgcaactgctgggctacgaggacgaggcccactgcgtggacctgatcgcc
cagcaggtgcagcagtggcgcaccgccacgcgcggcaagatggcaggcctggccgtgctg
ctgcgccatccgggccagtccatcgccattgaaaaccgcctgctggccgacggcgtgccc
tacaccgtgagcggctttgaaagctacctgttgcgccccgaggtgctgctggtgcgcggc
ctgctggccgtggccaccgacaacttcgacagcgtgaccgagccgcgcacccgcgaaaag
ctcatgcgtgccctggtcttcttctgcggcgcacgcattgtggtcaaggggcgcgagcac
gaatcgcagcacgagctgctggaagacgccattcgcagcgtgacggacaacccgctgttt
ctggagagctttttcacgaaccagatcgtggccaacgtggagcccgccatgcagcgccgc
ctgcgcaacgcgctgaaggtggcccaggaagcccagggccccgacaccctggcccgcctg
ctgcaagccctgcagatcgagaccgtggtgcgcgaggtgtttgtctcgcgccagcgccgc
gccgacgccctggccaacctggtcgggctgagccaggccgcccaggcctttgccagcgcg
cgcgactacttcttgcacctgaacgcggccgagcaacgccagcgcgagctgcgcagcacc
gctagtctggtgctggcccacatcggccacgtgaaggggctggagtttgagcacgtgctc
atcccgtacctggagcagggcgctttccccgacccccaggccccgcaggagcaggagcgc
aacacgctgtatgtgggcatgacccgtgcgcgccagcagctcaccctgctggcccaccag
cagcgccctagtgcgttggtggcccagctgggttacgctgtggccccgccgccgcaagcg
gccaaaacggcttga
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