Actinomadura citrea: OG979_00060
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Entry
OG979_00060 CDS
T09741
Name
(GenBank) HAMP domain-containing protein
Organism
acir
Actinomadura citrea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
GAF_2
HisKA
GAF
Laminin_II
PMC2NT
RNase_Y_N
DUF3450
ATG14
Motif
Other DBs
NCBI-ProteinID:
WUR52388
LinkDB
All DBs
Position
14285..18526
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AA seq
1413 aa
AA seq
DB search
MPRTASRARPSGGYRDTTPRYSDADLEPLLKALVAVRDGKARSELDVPGEGAVAEAAAVL
EEIRENGMELASGLSRVRREIGREGQLRGRLTPGTLRGTWAGAVEDANAIIDKLTDLATG
MSQVVEAVAAGDLSQRVELRVRGRPMRGELLRMAKSVNGMVELLDQFTWEVTQFAREVGT
EGRLGGQAPARGMTGRWRDVTASVNVMASRLTSQVRDIAEVTTAVARGDLTRKVTVEATG
ELQELKLTVNTMVDQLSAFAGEVTRVAREVGTEGQLGGQANVPGVSGVWKNLTDNVNAMA
NNLTYQVRNIAQVTTAVAEGDLGKKITVDAQGEILQLKNTVNTMVDTLSAFADEVTRVAR
EVGTEGRLGGQARVPGVSGVWKDLTNNVNGMASNLTYQVRNIAQVTTAVAEGDLGKKITV
DAQGEILELKDTVNAMVDTLSAFASEVTRVAREVGTEGRLGGQAIVPGAGGVWLDLTDNV
NSMANNLTNQVRGIAQVTTAVAQGDLTRKIEVDAQGEILQLKTTLNTMVDTLSAFADEVS
RVAREVGTEGRLGGQARVPGAGGMWKDLTDNVNGMASNLTYQVRNIAQVATAVAHGDLTR
RIDVDAQGEILELKTTLNTMVDTLSSFASEVTRVAREVGIEGRLGGQAEVEGVSGTWKRL
TESVNELAGNLTTQVRAIGEVASAVATGDLTRTITVEARGEVAELSDNVNLMVATLRETT
RANEEQDWLKTNLARIGGLMQGHRDLQQVADLIMRELTPTASAQYGAFYLAEIAGEEPDL
ALIAGYGTRRHRGGPVRFGLGEGLVGQAAQERRALLIADAPADYVKIGSGLGEASPVNII
VLPIVFEDEVLGAIELASFGRFTDVHLAFFSQLIETIGVTLNAIRANTRTEALLGESQRL
AQELQERSDELQRQQGELRHSNTELEEKAALLAQQNRAIEIQNFQIEQARRTLEERAEQL
AISSRYKSEFLANMSHELRTPLNSLLVLAKLLSENQDGNLTDKQVEFARTIHESGTDLLE
LINDILDLAKVEAGKMEAHPQRLSVSALVDYVDATFRPLSVDKGLQFGVEVAPDVPATFN
TDEQRLQQVLRNLLSNAVKFTAEGEVRLLIERAGDIDFTLPALWNTPDVIAFRVIDTGIG
VSADKLQEIFEPFQQADGTTSRRYGGTGLGLSISRNIARLLGGEIHAESQPGRGSVFTLY
LPAQYSDRDDRRRSTLPDDAVVAGAETAPGVVSGAPHGNRGVGGAAAEGALPVEQRRLGG
ERPGKSDQALNGMLREPPTDFLDTVLSGRKVLIVDDDVRNVFALTSVLEGYGMEVLYAED
GQAGIDVLHHNPDVAVVLMDIMMPGLDGYATTAAIREMPQFAELPIIVITAKVMKEDREK
SLASGASDYVPKPVDVDHLLDVMRNWLQPSIVR
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtaccgcgtcacgtgcccgcccgagcggcgggtaccgcgacaccaccccgcgt
tacagcgacgcggacctcgaaccgctcctgaaggcgctggtcgccgtgcgggacggcaag
gcgaggtcggagctggacgtgccgggcgagggcgccgtggcggaggccgcggccgtcctg
gaggagatccgggagaacggcatggagctggcctcgggcctgagccgtgtccggagggag
atcggccgggaggggcagctgcggggacgcctgacgccggggacgctgcggggcacctgg
gcgggcgcggtggaggacgccaacgcgatcatcgacaagctcaccgacctcgccaccggg
atgagccaggtggtggaggcggtggccgccggggacctgagccagcgggtggagctgcgg
gtacgcggcaggccgatgcgcggggagctgctgcgcatggccaagtcggtcaacggcatg
gtcgagctgctcgaccagttcacctgggaggtcacccagttcgcccgcgaggtcggcacc
gaggggcggctcggcgggcaggcgccggcgcgcggcatgaccggccgctggcgggacgtg
accgcgtcggtgaacgtgatggcgtcgcggctgacctcgcaggtccgcgacatcgcggag
gtcaccacggcggtggcccgcggcgacctgacccgcaaggtcacggtggaggcgaccggg
gagctgcaggagctgaagctcaccgtgaacacgatggtcgaccagctgtcggcgttcgcc
ggcgaggtcacccgcgtggcccgcgaggtcggcacggaggggcagctgggcggccaggcg
aacgtgccgggcgtcagcggcgtctggaagaacctgaccgacaacgtcaacgcgatggcg
aacaacctgacctaccaggtccgcaacatcgcgcaggtcaccaccgccgtcgccgagggc
gacctcggcaagaagatcacggtcgacgcgcagggcgagatcctgcagctcaagaacacc
gtcaacacgatggtcgacaccctgtcggcgttcgccgacgaggtcacccgggtcgcccgg
gaggtcggcaccgagggacggctcggcggccaggcccgggtgcccggcgtgagcggcgtg
tggaaggacctgaccaacaacgtcaacggcatggcgtccaacctgacctaccaggtccgc
aacatcgcgcaggtcaccacggccgtcgccgagggcgacctcggcaagaagatcacggtc
gacgcgcagggcgagatcctggagctcaaggacaccgtgaacgcgatggtcgacaccctg
tcggcgttcgcgtccgaggtcacccgcgtggcgcgggaggtcggcaccgaggggcggctc
ggcggccaggcgatcgtgcccggcgcgggcggggtctggctcgacctgaccgacaacgtc
aactcgatggcgaacaacctcaccaaccaggtgcgcgggatcgcgcaggtcaccacggcg
gtggcgcagggcgacctgacccgcaagatcgaggtcgacgcgcagggcgagatcctgcag
ctcaagaccacgctcaacaccatggtcgacacgctgtcggcgttcgccgacgaggtcagc
cgcgtcgcccgcgaggtcggcaccgagggacggctcggcggccaggcccgggtgcccggc
gcgggcggcatgtggaaggacctgaccgacaacgtcaacggcatggcgtccaacctgacc
taccaggtccgcaacatcgcgcaggtcgcgaccgcggtcgcgcacggcgatctgacgcgg
cgcatcgacgtggacgcccagggcgagatcctggagctgaagaccacgctgaacacgatg
gtggacacgctgtcgtcgttcgcgtccgaggtcacccgcgttgcgcgggaggtcggcatc
gagggccgtctcggcggccaggccgaggtcgagggcgtctcgggcacctggaagcggctc
accgagagcgtcaacgagctggccggcaacctgaccacccaggtccgcgcgatcggggag
gtcgcgagcgcggtcgccaccggcgacctgacccggacgatcaccgtggaggcgcgcggc
gaggtcgcagagctgagcgacaacgtgaacctgatggtcgcgacgctgcgcgagacgacc
cgcgccaacgaggagcaggactggctcaagaccaacctggcgcggatcggcgggctcatg
cagggtcaccgcgacctccagcaggtcgccgacctgatcatgcgtgagctgacgccgacc
gccagcgcccagtacggcgcgttctacctggccgagatcgcgggcgaggagcccgacctc
gcgctgatcgccgggtacgggacgcggcggcaccgcggggggcccgtccggttcgggctg
ggcgagggcctcgtcgggcaggcggcgcaggagcgccgggcgctgctgatcgccgacgcc
ccggccgactacgtcaagatcgggtcgggtctcggcgaggcgtccccggtcaacatcatc
gtgctgccgatcgtgttcgaggacgaggtgctcggcgcgatcgagctcgcctcgttcggc
cggttcaccgacgtccacctggcgttcttcagccagttgatcgagacgatcggggtcacg
ctcaacgcgatccgggccaacacccgcaccgaggcgctgctcggcgagtcgcagcggctc
gcgcaggagctgcaggagcgctcggacgagctgcagcgccagcagggcgagctgcggcac
tccaacaccgagctggaggagaaggcggcgctgctggcccagcagaaccgcgcgatcgag
atccagaacttccagatcgagcaggccaggcggacgctggaggagcgcgccgagcagctg
gcgatctcctcgcggtacaagtcggagttcctggcgaacatgtcgcacgagctgcgcacc
ccgctgaacagcctgctggtgctggccaagctgctgtcggagaaccaggacggcaacctc
accgacaagcaggtggagttcgcccggacgatccacgagtccggcaccgacctgctggag
ctgatcaacgacatcctggacctggcgaaggtcgaggccgggaagatggaggcgcatccg
cagcggctctcggtgtcggcgctggtcgactacgtggacgccacgttccgcccgctgtcg
gtcgacaagggcctgcagttcggggtggaggtcgcgccggacgtcccggccacgttcaac
accgacgagcagcggctgcagcaggtgctgcggaacctgctgtcgaacgcggtgaagttc
accgccgagggcgaggtgcggctgctgatcgagcgggccggcgacatcgacttcacgctg
cccgcgctgtggaacacccccgacgtgatcgcgttccgggtgatcgacaccgggatcggg
gtgagcgccgacaagctccaggagatcttcgagccgttccagcaggccgacgggaccacg
agccgccgctacggcggcaccgggctcggcctgtcgatcagccggaacatcgcgcgcctg
ctgggcggggagatccacgccgagagccagccgggccgcggcagcgtgttcacgctctac
ctgcccgcccagtacagcgatcgcgacgaccggcgccgctcgacgctgccggacgacgcg
gtcgtcgcgggcgcggagacggcccccggggtggtctccggtgccccgcacgggaaccgc
ggcgtcggcggggccgccgcggagggcgcgctgccggtggagcagcgccggctcggcggg
gagcgccccggcaagtccgatcaggcgctgaacgggatgctgcgggagccgcccacggac
ttcctcgacacggtcctgtcgggccgcaaggtcctgatcgtcgacgacgacgtgcggaac
gtgttcgcgctcaccagcgtcctggagggctacggcatggaggtcctctacgccgaggac
gggcaggccgggatcgacgtcctgcaccacaaccccgacgtggcggtcgtgctcatggac
atcatgatgccgggcctggacggctacgccaccacggccgcgatcagggagatgccgcag
ttcgccgagttgccgatcatcgtcatcacggccaaggtgatgaaggaggaccgggagaag
agccttgcctcgggcgcgtcggactatgtgccgaagcccgtggacgtggaccatctcctt
gatgtcatgaggaactggctgcagccctccatcgtccgctga
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