Actinomadura citrea: OG979_03465
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Entry
OG979_03465 CDS
T09741
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
acir
Actinomadura citrea
Pathway
acir03030
DNA replication
acir03410
Base excision repair
acir03420
Nucleotide excision repair
acir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OG979_03465 (polA)
03410 Base excision repair
OG979_03465 (polA)
03420 Nucleotide excision repair
OG979_03465 (polA)
03440 Homologous recombination
OG979_03465 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acir03032
]
OG979_03465 (polA)
03400 DNA repair and recombination proteins [BR:
acir03400
]
OG979_03465 (polA)
Enzymes [BR:
acir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OG979_03465 (polA)
DNA replication proteins [BR:
acir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OG979_03465 (polA)
DNA repair and recombination proteins [BR:
acir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OG979_03465 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OG979_03465 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
WUR53035
LinkDB
All DBs
Position
complement(742915..745605)
Genome browser
AA seq
896 aa
AA seq
DB search
MATSPTTPDKRDRLLLLDGHSLAYRAFFALPVENFSTTDGQPTNAVYGFTSMLINVLRDE
QPSHIAVAFDRSEPTFRHEQYVEYKAGRQKTPDEFRSQVSLIFEVLDALRIPRLSVAGFE
ADDIIATLSVQATRAGMQTLIVTGDRDAFQLVDDSVTILYPIRGVSELARMDPAAVEAKY
GVPPERYRELAALVGESSDNLPGVPGVGPKTAAKWLTKYGDLDTLVNRVGEIKGKAGDNL
REHLSGVLRNHQINKLDCEVGLELAPPQLAMGQWDRDEIHTLFDSLQFRVLRERLYSSIS
AAEPEAEEGFDVEVEALEPGALGAWLDANTAERIGVAVTGTWGRGTGEITALALASTKGP
AVHLDPVELIEDDERALAAYLADPARPKAIHEAKGPMLALAARGLRLEGVTSDTALAAYL
ALPGQRTFDLADLALRYLHRELRSETEDSGQLTLDGSGEEEAAEALAVRARAVTELADVL
DKDLEKRGATRLLHEVELPLVGVLAAMERAGIAVDADHLAGLSASLGGQVKEQEQLAHAA
VGREFNLGSPKQVQQVLFDELNLPKTKRTKTGYTTDSEALTTLLEKDGHPVLEHILRWRE
VAKLKSIVDSLIPMADDAGRIHTTFNQMIAATGRLSSTDPNLQNIPIRTAEGRQIREAFV
VGDGYESLLTADYSQIELRIMAHLSEDDALLEAFGSGADFHTITASRVFGLPPEQIDSEL
RARIKAMNYGLAYGLSAYGLSQQLRISPDEARGLMEEYFEQFGGVRDYLRDIVAKARQEG
YTETILGRRRYLPDLNSDNRQRREMAERMALNAPIQGSAADIIKVASLNVDRALRDAGLT
SRMLLQVHDELVFEVAPGELDDLKTLVSTQMADAYELRAPLGVSMGTGRTWQDAAH
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacctcaccaacgacccctgacaagcgcgaccggcttcttctgctcgacggccat
tccctggcctaccgggcgttcttcgcattgcccgtggagaacttctccacgaccgacggg
cagccgaccaacgccgtgtacggcttcacctcgatgctcatcaacgtcctgcgcgacgag
cagccgtcccacatcgcggtggcgttcgaccgctccgagccgacgttccggcacgagcag
tacgtggagtacaaggcgggccggcagaagacgcccgacgagttccgcagccaggtcagc
ctgatcttcgaggtgctggacgcgctgcgcatcccgcggctgtcggtcgccgggttcgag
gcggacgacatcatcgccacgctgtccgtccaggccacccgcgccgggatgcagaccctc
atcgtcaccggcgaccgcgacgcgttccagctggtcgacgactcggtgacgatcctgtac
cccatccgcggcgtgtcggagctggcccggatggacccggccgccgtcgaggccaagtac
ggcgtcccgcccgagcgctaccgcgagctcgccgccctcgtgggggagagcagcgacaac
ctgcccggcgtgcccggcgtcggcccgaagaccgccgccaagtggctcaccaagtacggc
gacctcgacaccctcgtgaaccgggtcggcgagatcaagggcaaggccggcgacaacctg
cgcgagcacctgtccggcgtgctgcgcaaccaccagatcaacaagctcgactgcgaggtc
ggcctggagctggcgccgccgcagctggcgatgggccagtgggaccgcgacgagatccac
accctgttcgactcgctgcagttccgggtcctgcgcgaacggctctactcctcgatctcg
gcggccgagcccgaggccgaggagggcttcgacgtcgaggtggaggcgctcgaacccggc
gcgctcggcgcctggctcgacgccaacaccgccgagcggatcggcgtcgccgtcaccggc
acctggggccgcggcaccggcgagatcaccgcgctggcgctggcgtccacgaagggtccc
gccgtccacctcgacccggtcgagctgatcgaggacgacgagcgcgccctcgccgcctac
ctcgccgaccccgcccgccccaaggcgatccacgaggccaagggcccgatgctggcgctc
gccgcgcgcggcttgcggctggagggcgtcaccagcgacaccgcgctcgccgcctacctc
gcgctccccggtcagcgcacgttcgacctcgccgacctcgccctgcgctacctgcaccgc
gagctgcgcagcgagaccgaggactccggccagctgaccctggacggctccggggaggaa
gaggccgccgaagccctcgccgtccgcgcgcgcgccgtcaccgaactcgccgacgtcctc
gacaaggacctcgagaagcgcggcgccacccgcctcctgcacgaggtcgagctgccgctg
gtcggcgtcctggccgccatggaacgcgcgggcatcgccgtcgacgccgaccacctggcg
ggcctgtcggcgtccctgggcggccaggtcaaggaacaggagcagctggcccacgccgcc
gtcggccgcgagttcaacctcggctcgcccaagcaggtccagcaggtcctgttcgacgag
ctgaacctgcccaagaccaagcgcaccaagaccggctacaccaccgactccgaggccctc
acgaccctcctggagaaggacggccaccccgtcctggagcacatccttcggtggcgggag
gtcgccaagctcaagagcatcgtcgactccctcatccccatggccgacgacgccggccgc
atccacaccaccttcaaccagatgatcgccgccaccggccggctctcctccaccgacccc
aacctgcagaacatcccgatccgcaccgccgaaggccgccagatccgcgaggccttcgtc
gtcggcgacggctacgagtccctcctcaccgccgactactcccagatcgagctgcgcatc
atggcgcacctgtcggaggacgacgccctgctggaggccttcggctccggcgccgacttc
cacaccatcaccgcctcccgcgtcttcggcctgccgcccgagcagatcgactccgagctg
cgcgcccgcatcaaggccatgaactacggcctcgcctacggcctgtccgcctacggcctc
tcccagcagctgcggatctcccccgacgaggcgcgcggcctcatggaggagtacttcgag
cagttcggcggcgtccgcgactacctgcgcgacatcgtcgccaaggcccgccaggagggc
tacaccgagaccatcctcggccgccgccgctacctgcccgacctcaactccgacaaccgc
cagcgccgcgagatggccgaacggatggccctcaacgcccccatccagggctcggccgcc
gacatcatcaaggtcgccagcctcaacgtcgaccgcgccctccgcgacgccggcctcacc
tcccggatgctcctccaggtccacgacgaactcgtcttcgaagtcgcccccggcgaactc
gacgacctgaagaccctcgtcagcacccagatggccgacgcctacgaactccgcgccccc
ctgggcgtctccatgggcaccggccgcacctggcaggacgctgctcactag
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