Actinomadura citrea: OG979_04475
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Entry
OG979_04475 CDS
T09741
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
acir
Actinomadura citrea
Pathway
acir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OG979_04475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acir03400
]
OG979_04475
Enzymes [BR:
acir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
OG979_04475
DNA repair and recombination proteins [BR:
acir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
OG979_04475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF7259
DUF1707
Motif
Other DBs
NCBI-ProteinID:
WUR53223
LinkDB
All DBs
Position
958361..959206
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AA seq
281 aa
AA seq
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MTSPTSPVGAHVPVAGGLATGGLKYAAEIGAEAVQVFVSNPRGWALPEGKPAEDAKLRDE
GIPVYVHAPYLVNLGSPTPETLDRSLAAVRHSLTRGRAIGARGVVVHTGSAVTRTYDEAM
AQVREHVLPLLDEIPEDGPDLLLEPMAGQNNMLCAKVQDLAPFFERLDHHPKLGVCFDTC
HAFAAGHDLAAPGGAKDTLDALVAAVGEGRLKLVHANDSKDACASAKDRHENIGAGQIGE
SPFADLFRHPATTGVPFIIETPGRAPAPHAEDIKTLKRLRG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacctcacccaccagccccgtcggggcgcacgtccccgtggccggcggcctcgccacc
ggcggcctgaagtacgccgccgagatcggcgccgaggcggtccaggtcttcgtctccaac
ccccgcggctgggccctgcccgaggggaagccggccgaggacgccaagctccgggacgag
ggcatccccgtctacgtccacgccccgtacctggtcaacctcggctcccccaccccggag
acgctcgacaggtcgctcgcggccgtccgccactccctgacccggggccgcgccatcggc
gcccgcggcgtcgtcgtccacaccggctccgccgtcacccggacctacgacgaggccatg
gcccaggtccgcgagcacgtgctgccgctcctcgacgagatccccgaggacggccccgac
ctgctcctggagcccatggccggccagaacaacatgctctgcgccaaggtccaggacctg
gccccgttcttcgagcgcctcgaccaccacccgaagctcggcgtctgcttcgacacctgc
cacgccttcgccgccggccacgacctggcggccccgggcggcgccaaggacaccctcgac
gccctggtcgccgccgtgggcgagggccgcctgaaactcgtccacgccaacgactccaag
gacgcctgcgcctccgccaaggaccgccacgagaacatcggcgccggccagataggcgaa
tcccccttcgccgacctcttccgccaccccgccacgaccggcgtccccttcatcatcgaa
accccgggccgagcccccgccccccacgcagaagacataaaaaccctaaaacgcctacgc
ggctga
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