Actinomadura citrea: OG979_04705
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Entry
OG979_04705 CDS
T09741
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
acir
Actinomadura citrea
Pathway
acir03030
DNA replication
acir03430
Mismatch repair
acir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OG979_04705
03430 Mismatch repair
OG979_04705
03440 Homologous recombination
OG979_04705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acir03032
]
OG979_04705
03400 DNA repair and recombination proteins [BR:
acir03400
]
OG979_04705
Enzymes [BR:
acir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OG979_04705
DNA replication proteins [BR:
acir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OG979_04705
DNA repair and recombination proteins [BR:
acir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OG979_04705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
DUF7508
RNase_H_2
UVR
Motif
Other DBs
NCBI-ProteinID:
WUR53268
LinkDB
All DBs
Position
complement(1006240..1008075)
Genome browser
AA seq
611 aa
AA seq
DB search
MTAAHGVQGRGVQGHGAQGHGVQGTLDDLGTPLRDVTFVVVDLETTGGSAADSAITEIGA
VKVRGGEELGELGTLVDPGGPVPPFITALTGITTAMVTAAPRIESVLPAFLEFARGCVLV
AHNASFDIGFLKAACAANGYAWPAFAVVDTVDLARRVLSRDEVPNCKLGTLARFFRTSNE
PTHRALADARATVEVLHGLIERLGSFGVTSLEEMRGFAKAPTPEQRRKRHLADDVPSTPG
VYLFEDHAGEVLYVGKSGDLRSRVRSYFTGSETRRRVREMVGLAENVRTIVCATGLEAEV
RELRLIAEHKPRYNRRSKFPERAIWLKLTVEPFPRLSIVRECRADGARYLGPISSRRQAE
EARAALHEAVPLRQCTQRLTLRLVERGKARSCALAELGRCGSPCDGRESADAYAVHTGTA
RSIMEGDVRPVVAAAQVRIDRLASELRYEEAAAQRDRLAAFVRAAARGQRLAALARLPQL
VAARPAFDGGWELSVVRYGRLAAAGTVPPNARPRPYVDALVATAETVFPPSGEAPGGVAL
GAPPSQGATAEEMECVLRWLDLPGVRLVEVDGPWTCPLHGAEGLREWIDKAYDRSYERPE
GARRGPRRPLR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcgcacggtgtccaagggcgcggagtccaggggcacggagcccaggggcac
ggcgtccagggcaccctggacgacctcggcacccccctccgcgacgtcaccttcgtggtg
gtcgacctggagaccaccggcggctcggcggccgactcggccatcaccgagatcggcgcg
gtgaaggtgcgcggcggagaggagctcggcgagctcggcacgctggtcgatccgggcggt
cccgtcccgccgttcatcaccgcgctgaccggcatcaccaccgcgatggtgacggccgcg
ccgcggatcgagtcggtgctgccggcgttcctggagttcgcgcgcggctgcgtcctcgtc
gcgcacaacgcctcgttcgacatcggcttcctcaaggccgcgtgcgccgcgaacggctac
gcctggcccgcgttcgcggtcgtcgacaccgtcgacctggcgcggcgcgtgctctcccgc
gacgaggtgcccaactgcaagctcggcacgctggcccgcttcttccggacgtccaacgag
cccacgcaccgggccctcgccgacgcccgcgccaccgtggaggtgctgcacggcctgatc
gagcggctcggctcgttcggcgtcacctcgctggaggagatgcgcggcttcgccaaggcg
cccacccccgagcagcgccgcaagcggcacctcgccgacgacgtcccctccacccccggc
gtctacctgttcgaggaccacgccggcgaggtcctgtacgtgggcaagagcggcgacctg
cgctcgcgcgtgcgcagctacttcaccggctcggagacgcgccggcgcgtccgggagatg
gtcggcctcgccgagaacgtccgcaccatcgtgtgcgccacggggctggaggccgaggtc
cgcgagctgcggctgatcgccgagcacaagccgcgctacaaccgccgctccaagttcccc
gagcgggcgatctggctgaagctgaccgtggaaccgttcccgcggctgtccatcgtgcgg
gagtgccgcgccgacggcgcccgctacctcgggccgatctcctcgcggcggcaggccgag
gaggcccgcgccgcgctccacgaggccgtgccgctgcggcagtgcacccagcggctgacg
ctccggctggtggaacgcggcaaggcgcgttcgtgcgccctcgccgagctcggccggtgc
ggctcgccctgcgacggccgcgagtccgccgacgcctacgccgtccacaccgggacggcc
cgctccatcatggagggcgacgtgcggcccgtcgtggccgccgcgcaggtccgcatcgac
cggctggcctccgagctgcgctacgaggaggccgccgcccagcgcgaccggctcgccgcg
ttcgtccgggccgccgcgcgcgggcagcggctcgcggcactggcccggctgccccagctc
gtggccgcccgccccgccttcgacggcggctgggagctgtcggtcgtgcgctacggccgg
ctcgccgccgccggcaccgtcccgccgaacgcccggccgcggccctacgtcgacgcgctc
gtcgcgaccgccgagacggtgttcccgccctccggggaggcgcccggcggcgtggcgctc
ggcgcgcccccctcgcagggcgcgaccgccgaggagatggagtgcgtcctgcgctggctc
gacctgcccggcgtgcgcctggtcgaggtcgacggcccgtggacgtgcccgctgcacggc
gccgaagggctgcgcgagtggatcgacaaggcctacgaccggagctacgagcggcccgag
ggggcccggcgcgggccccgccgcccactaaggtga
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