Actinomadura citrea: OG979_05850
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Entry
OG979_05850 CDS
T09741
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
acir
Actinomadura citrea
Pathway
acir00300
Lysine biosynthesis
acir00470
D-Amino acid metabolism
acir01100
Metabolic pathways
acir01110
Biosynthesis of secondary metabolites
acir01120
Microbial metabolism in diverse environments
acir01230
Biosynthesis of amino acids
Module
acir_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OG979_05850 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OG979_05850 (dapF)
Enzymes [BR:
acir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
OG979_05850 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WUR53485
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Position
complement(1251211..1252011)
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AA seq
266 aa
AA seq
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MRFVKGHGTENDFVILPDPDGVLDLTPEAVARLCDRRAGIGADGVLRAVRTKATEFDADA
EWFMDYRNADGGIAEMCGNGVRVFARYLVDAGLAPPGEWDLATRAGLRRVTLGPSGDVSV
EMGLPELLGPGEASLAGASFAGERVSVGNPHLACRVTEPVAALDLSHAPDFDPAVFPAGV
NVEFYRSVGERHVEMRVYERGSGETRSCGTGTVAVAAAAARGTADGAEWTVDVPGGRVTV
VLDGETSFLRGPAVLVAEGETRPGWI
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcgtcaaagggcacggcaccgagaacgacttcgtgatcctccccgatccggac
ggtgtcctggacctcaccccggaggccgtcgcgcggctctgcgaccggcgggcgggcatc
ggcgccgacggcgtcctgcgcgcggtccggacgaaggccaccgagttcgacgccgacgcc
gagtggttcatggactaccgcaacgccgacggcggcatcgccgagatgtgcggcaacggg
gtgcgcgtcttcgcccgctacctggtcgacgcgggcctggccccgcccggggagtgggac
ctggccacccgcgcgggcctgcgccgcgtgacgctcggcccgtccggggacgtcagcgtg
gagatgggcctgccggagcttctcggcccgggggaggcgtccctggcgggcgcgagcttc
gcgggcgagcgggtcagcgtcggcaatccccacctggcgtgccgcgtcaccgagccggtc
gccgccctggacctgtcgcacgccccggacttcgacccggcggtcttccccgcgggggtg
aacgtcgaattctaccgcagcgtgggggagcggcacgtcgagatgcgggtgtacgagcgc
ggctccggcgagacccggtcgtgcggcaccggtaccgtcgcggtggccgccgcggcggct
cgcggcacggccgacggcgccgaatggaccgtggacgtccccggcggcagggtgaccgtc
gtcctggacggcgagaccagtttcctgagggggccggccgtcctggtggccgagggcgag
acgcggcccggctggatttag
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