Actinomadura citrea: OG979_05945 Help Entry OG979_05945       CDS       T09741                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism acir  Actinomadura citrea Brite KEGG Orthology (KO) [BR:acir00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:acir03400]     OG979_05945 Enzymes [BR:acir01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      OG979_05945     5.6.2.6  RNA 3'-5' helicase      OG979_05945 DNA repair and recombination proteins [BR:acir03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     OG979_05945 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr WH4_Lhr WH3_Lhr DEAD WH2_Lhr Helicase_C ResIII AAA_25 DUF6406 Motif Other DBs NCBI-ProteinID:  WUR53502 LinkDB All DBs Position 1271323..1275972 Genome browser AA seq 1549 aa AA seqDB search MGGDVLERFSPATRAWFTGAFAAPTPAQAGAWESVAGGDNTLVVAPTGSGKTLAAFLWSL DRLGTEALPEDPLRRCRVLYVSPLKALAVDVERNLRAPLTGIRHAARRLGLPEPDVRVGM RSGDTPADERRRLAVRPPDILITTPESLFLILTSRARESLRGVETVIVDEVHAVAGTKRG AHLALSLERLDALLERPAQRIGLSATVRPADEVAAFLGGPRPAAVVQPRSEKVFELDIVV PVEDMGEVGRFVDDSGTADPRRRSIWPHVEDRLLDLIQAHRSTLVFANSRRLAERLCGRL NELAYERAAGESLPEDHSPAAAMAQAGAAKGAPSEIARAHHGSVSKEERAGIENALKEGR LPAVVATSSLELGIDMGAVDLVVQVESPPSVANGLQRVGRAGHQVGAVSKGVIFPKYRGD LVQTAVVAERMRGGEIEELRYPRNPLDVLAQQIVAMVSMDEWTVDDLESLVKRAAPYATL PRSALEASLDMLAGRYPSDEFGELRPRLVWDRVTGVLRDRPGAQRLAVTSGGTIPDRGLF GVFLVGEKASRVGELDEEMVYESRVGDVFVLGASSWRIEDITPDRVLVSPAPGQPGKLPF WHGDTLGRPAELGRALGTFTRELAELSQQEAQARVTASGLDDWASANLVSYLTEQREATG HIPDDRTMVVERFRDELGDWRMVVHSPLGARVHAPWALAIAGRLRERYGVDAQAMHADDG IVIRIPDMDEPPGLDLAVFDADDIERVVVDELGGSALFAARFRECAARSLLLPRRRPDKR MPLWQQRQRAAQLLAVASKYPSFPIVLETMRECLQDVFDVPGLVQLMRDMSGRKVRMVEV ETSEPSPYARSLLFHYVGAFMYEGDSPLAERRAQALALDSALLAELLGQADLRELLDPDA VAETERELQRLAADRRARDMEGVADLLRALGPLSTAEAAERTLPAGLGAQPDESAATAGD AEAAAAGDPVPGAVLVQVSRWLAELEATRRAIRVRIAGEERWAAIEDAGRLRDALGAPLP VGVPEAFLEPVDDPLGDLVSRYARTHGPFRAAEAAARFGLGVAVVVETLRRLSGAGRVVE GEFLPVGSVAGPLTTEWCDGGVLRMLRRRSLARLRAEVEPSPPESLGRFLPAWHGIAGGS RLRGIDALVQAIEQLQGAAVPASALESLVLPSRVPGYSPAMLDELTSAGEVVWAGQGGLP GGDGWVALYLADTAPLLMPAPAEITLTPVHQAALDALGDGGALFFRTLSDRVNKQADAND ADLVTAVWDLVWAGHLTNDTLAPLRSALGSGRPTHRSRTTRRGRPVLPSRTGPPTVAGRW WPLPEREPTATLRSHALAEALLERYGIVIRGAVAAERTPGGFSAVYPVLRAFEETGRCRR GYFVEGLGAAQFALPGAVDRLRALRPAASAPDDISALWEAPRKPGVRALVLAAADPANPY GAALPWPERADEVASGHKPGRKAGALVVLVEGRLVLYVERGGRTLLTWDDDPDVLQPAVD ALALSVREGALGKLTVERADGEAISDSPLAAALESAGFHPTPRGLRLRS NT seq 4650 nt NT seq  +upstreamnt  +downstreamnt atgggcggtgacgtgctcgaacgcttctccccggcgacccgcgcctggttcaccggggcg ttcgccgcacccacccccgcgcaggccggcgcctgggagtccgtcgccggcggcgacaac acgctggtcgtggcgccgaccgggtccggcaagaccctggcggccttcctgtggtccctc gaccggctcggcaccgaagccctccccgaagacccgctgcgccgctgccgcgtcctgtac gtgtcgccgctcaaggccctcgccgtggacgtcgagcgcaacctgcgcgccccgctgacc ggcatccgccacgcggcgcgccgcctcggccttcccgagccggacgtccgcgtcgggatg cgctcgggcgacaccccggccgacgagcgccgccggctggccgtcaggccgcccgacatc ctgatcacgaccccggagtcgctgttcctgatcctcacctcgcgggcgcgcgagtcgctg cgcggggtggagaccgtcatcgtcgacgaggtgcacgccgtggcgggcaccaagcggggc gcgcatctcgcgctgtccctcgaacggctggacgcgcttctggaacgccccgcccagcgc atcggcctgtcggcgacggtccgtcccgcggacgaggtggcggcgttcctgggcgggccg aggcccgccgccgtcgtccagccgcgttcggagaaggtgttcgagctcgacatcgtcgtc ccggtggaggacatgggcgaggtcggccggttcgtcgacgactcggggacggccgacccc cgccggcgcagcatctggccccacgtggaagaccgtctgctcgacctcatccaggcgcat cgctcgacgctcgtgttcgccaactcccggcgcctggccgagaggctgtgcgggcggctg aacgaactcgcctacgaacgcgcggccggcgaatccctgcccgaggaccactcccccgcg gccgcgatggcccaggcgggtgccgccaagggggcgccctcggagatcgccagggcgcac cacggctccgtctccaaggaggagcgggccggtatcgagaacgccctgaaggagggccgc ctgcccgcggtcgtggcgacgtccagcctggaactgggcatcgacatgggcgcggtggac ctggtcgtccaggtggagtcgccgccgtcggtcgccaacgggctccagcgggtcgggcgt gccggccaccaggtcggcgccgtgtccaagggcgtcatcttccccaagtaccggggcgac ctcgtgcagacggccgtggtggccgaacgcatgcgcggcggcgagatcgaggagctgcgg tatccgcgcaaccccctcgacgtcctcgcccagcagatcgtcgcgatggtctcgatggac gagtggacggtcgacgacctcgaatccctcgtcaagcgggccgccccctacgccacgctt ccccgctcggcgctggaggcgtccctggacatgctcgccgggcgctaccccagcgacgag ttcggcgagctccgcccccgcctcgtctgggaccgcgtgaccggcgtgctgcgcgaccgt ccgggcgcccagcggctcgccgtgaccagcggtgggacgatccccgaccgcggcctgttc ggggtgttcctcgtcggcgagaaggcgtcgcgcgtcggtgaactcgacgaggagatggtg tacgagtcgcgcgtgggggacgtgttcgtcctcggcgcgagctcatggcggatcgaggac atcacccccgaccgcgtgctcgtctcccccgcgccgggccagcccggcaagctgccgttc tggcacggcgacacgctggggcgtccggcggagctgggccgcgcgctcggtaccttcacc cgggagctggccgagctctcccagcaggaggcgcaggcacgcgtcaccgcgtcgggcctg gacgactgggcctccgccaacctcgtctcgtacctgaccgagcagcgcgaggccaccggt catatccccgacgaccggacgatggtcgtcgaacggttccgcgacgaactcggtgactgg cgcatggtcgtccactcgccgctgggcgcgcgtgtgcacgcgccctgggcgctcgccatc gccggtcgcctgcgcgagcggtacggcgtcgacgcgcaggccatgcacgccgacgacggc atcgtcatccgcataccggacatggacgagccacccggcctcgacctggccgtcttcgac gccgacgacatcgagcgcgtcgtcgtcgacgagctgggcggctcggcgctgttcgccgcc cggttccgcgagtgcgcggcgcgttcgctgctgctcccccgccgccgccccgacaagcgc atgcccctgtggcagcagcgccagcgcgccgcgcagctcctggccgtggcgagcaagtac ccgtcgttcccgatcgtgctggagaccatgcgcgagtgcctgcaggacgtgttcgacgtc ccgggcctggtccagctcatgcgcgacatgtccggacgcaaggtccgcatggtggaggtg gagacctccgagccgtccccctacgcgcgctccctgctgttccactatgtcggcgcgttc atgtacgagggcgactcgcccctggcggagcgccgcgcccaggccctcgcactcgactcg gcgctcctcgccgaactgctcggccaggccgatctgcgcgagctgctcgatcccgacgcc gtcgccgagaccgaacgcgagctccagcgcctcgcggccgaccgccgtgcgcgcgacatg gagggcgtcgccgatctcctgcgcgccctcggccccctgagcacggcggaagcggccgag cgcacactgcccgcgggccttggcgcccaaccggacgagagcgccgccacggccggtgac gcggaggccgccgcggcgggcgatcccgtcccgggcgcggtgctcgtccaggtgtcgcgg tggctggcggagctggaggcgacgcggcgggcgatccgggtgcggatcgccggggaggag cgctgggcggcgatcgaggacgccggccgcctgcgggacgcgctcggtgcgccgctgccg gtgggcgtcccggaggcgttcctcgaaccggtcgacgacccgctcggcgacctggtctcc cggtacgcgcgcacgcacgggccgttccgggcggccgaggccgccgcgcggttcgggctg ggcgtcgccgtggtcgtcgagacgctgcggcggctgtcgggcgcgggccgggtcgtcgag ggcgagttcctgccggtcgggtccgtggcgggcccgctgacgaccgaatggtgcgacggc ggcgtgctgcggatgctgcggcggcgttccctggcgcgcctgcgcgccgaggtcgagccg tccccgccggagtcgctcggccggttcctgccggcctggcacggcatcgcgggcgggtcg cggctgcggggcatcgacgcgctcgtccaggcgatcgagcagttgcagggcgcggcggtg cccgcgtccgcgctggagtcgctggtcctgccgtcgcgggtgcccggctactccccggcc atgctggacgagctgacgtcggccggcgaggtcgtttgggcgggccagggagggctgccg ggcggcgacggctgggtggcgctgtacctggccgacaccgctccgctgctcatgccggcc ccggccgagatcacgctcacgcccgtgcaccaagccgccctcgacgccctcggtgacgga ggcgcgttgttcttccgcacgctgtccgaccgcgtgaacaagcaggccgacgcgaacgac gccgacctcgtcaccgccgtgtgggacctcgtctgggccggccacctcaccaacgacacg ctggccccgctgcggtccgcgctcgggtcgggccgtccgacgcaccgttcccggacgacg cggcgcggacgtcccgtcctgccgtcccggacgggcccgcccacggtcgccgggcgctgg tggccgctccccgagcgcgagcccaccgcgaccctgcgctcgcacgccctcgccgaagcg ctcttggagcggtacggcatcgtcatccgcggcgccgtcgcggccgaacgcacccctggc gggttctccgccgtctacccggtcctgcgcgcgttcgaggagacggggcgttgccggcgg ggctacttcgtcgagggcctcggagccgcccagttcgcgctgccgggggccgtcgaccgc ctccgcgcgctccgcccggcggcctccgcaccggacgacatctccgccctctgggaggcg ccccgcaaacccggggtccgcgcgctcgtcctggcggcggccgatcccgccaacccctac ggcgccgccctgccctggccggaacgcgccgacgaggtcgccagcggccacaagccgggc cgcaaggccggcgcgctcgtcgtgctggtcgagggacgcctggtcctctacgtcgaacgc ggcgggcggacgctcctgacctgggacgacgacccggacgtcctacaacccgccgtcgac gccctcgccctgtccgtccgcgagggggcgctcggcaagctgaccgtggagcgcgccgac ggcgaggcgatcagcgactccccgctggccgccgcgctggagtcggcgggcttccatccc acgccgcgcgggctgcggctgcgctcctga

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