Actinomadura citrea: OG979_06050
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Entry
OG979_06050 CDS
T09741
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
acir
Actinomadura citrea
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acir03009
]
OG979_06050 (rimO)
Enzymes [BR:
acir01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OG979_06050 (rimO)
Ribosome biogenesis [BR:
acir03009
]
Prokaryotic type
ribosomal protein modification factors
OG979_06050 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WUR53520
LinkDB
All DBs
Position
complement(1294989..1296416)
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AA seq
475 aa
AA seq
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MSTRRKVSLITLGCARNEVDSEELAARIEDAGWDLADGADGADVVVVNTCGFIEAAKKDS
IDTLLAAHDSGAKVVAAGCMAERYGSELAEALPEADAVIGFDDYTAIGERLDDVVAGRRR
DAHTPRDRRTLLPISPVERRAHASQVAVPGHGGQDDLPAGVAPASGPRVLRRRLGGGPVA
PLKLASGCDRRCTFCAIPAFRGAYVSRPPAEVLEEARWLADHGVRELVLVSENSTSYGKD
LGDLRALEKLLPALAAVDGIERVRVSYLQPAETRPGLIEAICGTPGVAPYFDMSFQHASG
PVLRSMRRFGDRERFLGLLDQIRALAPEAGVRSNFIVGFPGEGEDDFEELAEFLSAARLD
AVGVFGYSDEDGTEAANLDGKLDPADVAARVEELSGLAEELTAQRAEDRVGSVVRVLLED
KADQAGDGGFEGRAEHQAPEVDGTVLVRGEGLALGDIVEARVVGSDGVDLVADVS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcgccgcaaggtctcactcatcacgctcggctgcgcccgcaacgaggtcgat
tccgaggagctcgccgcgcgcatcgaggacgcgggctgggacctggcggacggtgcggac
ggcgccgacgtggtggtcgtcaacacctgcgggttcatcgaggctgccaagaaggactcc
atcgacacgctgctggccgcgcacgactccggtgccaaggtcgtcgccgccgggtgcatg
gccgagcggtacggcagcgagctggccgaggcgctccccgaggccgacgcggtgatcggc
ttcgacgactacaccgcgatcggcgagcgtctcgacgacgtcgtggcgggacgcaggcgc
gacgcgcacaccccgcgcgaccgccgcaccctcctgccgatcagcccggtcgagcggcgg
gcgcacgcctcccaggtcgccgttccggggcacggcgggcaggacgacctgccggccggc
gtggccccggcgtcgggtccgcgggtgctgcggcggcgcctcggcggcggcccggtcgcg
ccgctgaagctggcgtccggctgcgaccggcgctgcacgttctgcgcgatccccgcgttc
cgcggagcgtacgtgtcgcgcccgccggcggaggtgctggaggaggcgcgctggctcgcc
gaccacggcgtccgcgagctggtcctcgtcagcgagaactccacgtcctacggcaaggac
ctcggcgacctgcgggcgctggagaagctgctgccggcgctcgccgcagtcgacggcatc
gagcgggtgcgggtcagctacctgcagcccgccgagacgcgccccggcctcatcgaggcg
atctgcggcacgcccggcgtcgcgccgtacttcgacatgtccttccagcacgcgagcggc
ccggtgctgcgctcgatgcgccggttcggcgaccgggagcggttcctcggactgctggac
cagatccgcgcgctggcgccggaggcgggcgtgcgctccaacttcatcgtcgggttcccg
ggcgagggggaggacgacttcgaggagctggcggagttcctgtcggccgcccggctcgac
gccgtcggcgtgttcggctactccgacgaggacggcacggaggccgcgaacctggacggc
aagctcgaccccgccgacgtcgccgcccgcgtcgaggagctgtccggcctcgccgaggag
ctgaccgcgcagcgcgccgaggaccgcgtcggctccgtggtccgcgtcctgttggaggac
aaggcggaccaggcgggggacggcggcttcgagggccgcgccgagcaccaggcgcccgag
gtggacgggacggtcctggtccgcggcgagggtctcgcgctcggcgacatcgtggaggcc
cgggtggtgggcagcgacggggtggacctcgtcgccgacgtctcatga
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