Actinomadura citrea: OG979_06880
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Entry
OG979_06880 CDS
T09741
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
acir
Actinomadura citrea
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acir03036
]
OG979_06880 (smc)
Chromosome and associated proteins [BR:
acir03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
OG979_06880 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WUR53675
LinkDB
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Position
complement(1465881..1469543)
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AA seq
1220 aa
AA seq
DB search
MYLKNLTLRGFKSFASSTTLKFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK
MEDVIFAGTANRAPLGRAEVVLTIDNSDGALPIDYTEVTISRLMFRSGSSEYAINGDACR
LLDIQELLSDSGIGREMHVIIGQGQLDRVLHSGPEGRRAVIEEAAGVLKHRKRKEKALRK
LDAMQGNLTRVQDLTGELRRQLKPLGRQAEIARRAAVIQADLRDARLRLLADDMVTLRTR
LEQEAADEAAIRERRTETERALGGAQEREAVLEAEEAEQAPRLAQVQDTWFQLSALKERL
RGVADLAAERHRNAAEAREEERRGRDPEDMEREAAEIREQEEMLREALDGARDGLSHAVD
ERSAAEEALAAEDRRLQSAARAAADRREELARLRGRVEALRSKAQAGRSEIGRLADAREE
AGQRTEAAQAEFEAFEAEVVEDPALAAEHETAQEALAAAKDAAETARAAVDGPRRALKEA
RSAAGAARTADQTAQKQVAALQARIEALNLTLASAADGGEALLSAGADGSLGGVLGTVAS
LLNVRPGYETAIAAALGGAAEAIAVGSLDTAGAALALLRSRDAGRAGLVIGGGAPARAER
VAGADYAIDAVGVPDAVRPAFEHLLRDVVVVEDVPAAVALVRGEASLRAVTRDGELVGAH
WAQGGAAGGGQSLLQMRATLDQATEDLAAAETAAAAAAGGLTEAVEREHAAQAAVEGAEA
AAGDARAVVDRAQAELDRVRVRLREYDAQAAQEAKRAARLEADVRAARGEAERLTKALDA
AGESLERDTEAAEELAVRLAEAEEAAEVAEEAGHDTESRDELNARCQELRTAEMEARLAV
RTAEERVQAIAGRADALERGAHREREERARAAQRRARREEQARVAKAVLRGARAALERIE
HSLAAAVRRREAAEQAKAAREAELKVVRGQVRELSSILERLVNVVHGNEVARAEQRLRLE
QFEQRALEEFGLEVESLVSEYGPDQPVPADPDKGEDARPAPYERAVQEKRAKTAERQLNQ
LGKINPLALEEFAALEERHAFLTSQLEDLKKTQRELLGLVKEVDDRVQQVFATAYDDTAR
EFERIFARLFPGGEGSLSLTEPGDMLTTGVEVSARPPGKKVKRLSLLSGGERSLVAIAFL
VAVFKARPSPFYVLDEVEAALDDTNTQRLITVFEELRESSQLIVITHQKRTMEGADALYG
VSMRGDGVTQVVSQRLRDLD
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
gtgtatctgaagaatctgacgctgcgcggcttcaagtccttcgcgtcgtccaccacgctc
aagttcgagccggggatcaccgccgtggtcgggcccaacgggtccggtaagtccaatgtg
gtggacgcgctggcctgggtgatgggggagcagggcgccaagtcgctgcgcggcggcaag
atggaggacgtcatcttcgccgggacggccaaccgggcgccgctggggcgcgccgaggtc
gtgctgacgatcgacaactccgacggcgcgctgccgatcgactacaccgaggtcaccatc
agccggctgatgttccggtcggggtcgagcgagtacgcgatcaacggtgacgcgtgccgg
ctgctggacatccaggagctgctgtcggactcgggcatcggccgcgagatgcacgtgatc
atcgggcaggggcagctcgaccgcgtcctgcactcggggccggaggggcggcgcgcggtg
atcgaggaggcggccggcgtcctcaagcaccgcaagcgcaaggagaaggccctccgcaag
ctggacgcgatgcagggcaatctcacgcgcgtgcaggacctgaccggcgagctgcggcgg
cagttgaagcccctcggccggcaggcggagatcgcgcgccgggccgcggtgatccaggcc
gacctgcgggacgcccggctgcggctgctcgccgacgacatggtcacgctgcggacgagg
ctggagcaggaggccgccgacgaggccgcgatccgggagcggcgcaccgagaccgagcgg
gcgctgggcggggcgcaggagcgcgaggccgtcctggaggcggaggaggcggagcaggcg
ccgaggctcgcgcaggtccaggacacctggttccagctgtcggcgctgaaggagcggctc
cgcggggtcgccgacctcgccgccgagcggcaccgcaacgccgccgaggcgcgcgaggag
gagcggcgcggccgcgaccccgaggacatggagcgcgaggccgccgagatccgcgagcag
gaggagatgctccgcgaggcgctggacggggcccgggacgggctctcccacgccgtggac
gagcggtcggccgcggaggaggccctcgccgccgaggatcggcggctccagtccgcggcc
cgcgccgccgccgaccgccgcgaggagctggcccggctgcgcggccgggtcgaggcgctg
cgcagcaaggcgcaggccggacggtcggagatcgggcggctcgcggacgcgcgggaggag
gccgggcagcgcaccgaggccgcgcaggccgagttcgaggcgttcgaggccgaggtcgtc
gaggatcccgcgctcgcggccgagcacgagaccgcgcaggaggcgctcgccgcggccaag
gacgccgccgagacggcccgcgccgccgtggacggcccgcgccgcgcgctgaaggaggcc
cggtcggccgcgggggcggcccgcaccgccgaccagacggcccagaagcaggtcgcggcc
ctccaggcccggatcgaggccctgaacctcacgctcgccagcgccgccgacggcggggag
gcgctgctgtcggcgggcgccgacgggtcgctcggcggggtgctgggcacggtcgcctcg
ctgctgaacgtccggcccgggtacgagaccgccatcgccgccgcgctcggcggcgccgcc
gaggccatcgcggtcgggtccctggacaccgccggggccgccctcgcgctgctgcgctcc
cgcgacgccggacgcgccgggctggtcatcggcggcggggcgccggcgcgggccgagcgg
gtcgccggggccgactacgccatcgacgcggtcggcgtcccggatgccgtgcggcccgcg
ttcgagcatctgctgcgggacgtggtcgtggtcgaggacgttcccgccgcggtcgcgctc
gtgcgcggggaggcgtcgctgcgggccgtcacgcgggacggggagctcgtcggggcgcac
tgggcgcagggcggcgccgcgggcggggggcagagcctcctgcagatgcgcgcgacgctc
gaccaggccaccgaggatctcgccgcggccgagaccgccgctgccgccgcggccggcggg
ctcaccgaggcggtggagcgcgagcacgccgcccaggccgccgtcgagggggccgaagcc
gccgccggtgacgcccgggcggtggtcgaccgcgcgcaggccgaactcgaccgcgtccgc
gtgcggctgcgggagtacgacgcgcaggcggcgcaggaggccaagcgcgccgcccgcctg
gaggccgacgtccgggccgcgcggggcgaggccgagcggctgaccaaggccctggacgcg
gcgggggagtccctcgaacgcgacaccgaggcggccgaggagctggcggtgcggctcgcc
gaggccgaggaggccgccgaagtggccgaggaggccgggcacgacaccgagtcgcgcgac
gagctgaacgcccgctgccaggagctgcgcaccgcggagatggaggcgcggctcgcggtc
cgcaccgcggaggagcgcgtccaggccatcgccggacgcgccgacgccctcgaacgcggc
gcccaccgcgagcgcgaggagcgggcccgcgccgcccagcgccgcgcccgccgggaggag
caggcccgggtcgccaaggccgtcctgcggggcgcccgcgcggccctggagcgcatcgag
cactccctcgccgccgcggtgcgccgccgcgaggccgccgagcaggccaaggcggcgcgc
gaggccgagctgaaggtcgtccgcgggcaggtccgcgagctgtcctcgatcctcgaacgc
ctggtcaacgtcgtccacggcaacgaggtcgcccgcgccgagcagcggctgcggctggag
cagttcgagcagcgggccctggaggagttcggcctggaggtcgagtcgctggtgtcggag
tacgggcccgaccagcccgtcccggccgacccggacaagggcgaggacgcgcggcccgcc
ccgtacgagcgggccgtacaggagaagcgcgccaagaccgccgagcggcagctcaaccag
ctcggcaagatcaacccgctggccctggaggagttcgccgccctggaggagcggcacgcg
ttcctcacctcccagctggaggacctgaagaagacccagcgcgaactgctcggcctggtc
aaggaggtcgacgaccgcgtccagcaggtgttcgccaccgcctacgacgacaccgcccgc
gagttcgagcggatcttcgcccggctgttccccggcggcgagggcagcctctcgctgacc
gagccgggcgacatgctcaccacgggcgtcgaggtctcggcccgcccgcccggcaagaag
gtcaagcggctgtcgctgctgtcgggcggcgagcggtccctcgtggccatcgcgttcctc
gtcgccgtgttcaaggcccgcccgtccccgttctacgtgctggacgaggtcgaggccgcg
ctcgacgacaccaacacccagcggctgatcacggtcttcgaggagctgcgcgagtcgtcc
cagctgatcgtcatcacgcaccagaagcgcaccatggagggcgccgacgccctctacggc
gtcagcatgcgcggcgacggcgtcacccaggtcgtcagccagcgcctgcgcgacctcgac
tga
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