Actinomadura citrea: OG979_08245
Help
Entry
OG979_08245 CDS
T09741
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
acir
Actinomadura citrea
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acir03021
]
OG979_08245
Transcription machinery [BR:
acir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OG979_08245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_5
HTH_Crp_2
MarR_2
PF0610-like_N
DUF7343
MarR
HTH_3
Sigma70_ECF
HTH_28
NirdL-like_HTH
HTH_24
GerE
HTH_AraC
HTH_29
IF2_N
Motif
Other DBs
NCBI-ProteinID:
WUR56471
LinkDB
All DBs
Position
1754336..1755094
Genome browser
AA seq
252 aa
AA seq
DB search
MPDRARARALFERLTELPEGDPERQRIRDQLVELHLPLVEYLARRFRNRGEWLDDLIQVA
TIGLIKSIDRFDLERGVEFSTYATPTIVGEIKRHFRDKGWAVRVPRRLQELKLSLTKAIS
DLAQKEGRAPTVSELAAHLQMTEEEVLEGLESANAYSTVSLDAPDSGDEDAPAVADSLGM
VDESLEGVEYRESLKPLLEKLPAREKKILLLRFFGNMTQSQIAAELGISQMHVSRLLART
LAQLRDGLTADE
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaccgggcccgggcgcgcgcgctgttcgagcgtctcaccgagctgccggagggc
gacccggagcgccagcgcatccgcgaccagctcgtggagctgcatctgccgctggtggag
tatctcgcccggcgcttccgcaaccgcggggagtggctggacgacctgatccaggtcgcc
acgatcgggttgatcaagtcgatcgaccggttcgacctggagcgcggggtggagttctcc
acctacgccacgccgacgatcgtcggtgagatcaagcggcacttccgcgacaagggctgg
gcggtgcgcgtgccgcgccggctgcaggagctgaagctgtcgctgacgaaggcgatcagt
gatctcgcccagaaggagggccgcgccccgaccgtgagcgagctggcggctcacctgcag
atgaccgaggaggaggtgctggaggggctggagtcggcgaacgcctattccacggtgtcc
ctcgacgcgcccgactccggcgacgaggacgccccggcggtggcggactcgctcggcatg
gtggacgagtcgctggagggcgtggagtaccgcgagtccctcaagccgctgctggagaag
cttccggcgcgcgagaagaagatccttctgctgcgcttcttcggcaacatgacgcagtcg
cagatcgcggcggagctcggcatctcccagatgcacgtgtcccggctgctggcgcggacc
ctcgcgcagctccgcgacggcctgaccgccgacgagtag
DBGET
integrated database retrieval system
