Actinomadura citrea: OG979_08930
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Entry
OG979_08930 CDS
T09741
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acir
Actinomadura citrea
Pathway
acir03420
Nucleotide excision repair
acir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OG979_08930
03430 Mismatch repair
OG979_08930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acir03400
]
OG979_08930
Enzymes [BR:
acir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OG979_08930
DNA repair and recombination proteins [BR:
acir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OG979_08930
MMR (mismatch excision repair)
Other MMR factors
OG979_08930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH
DUF6011
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WUR54055
LinkDB
All DBs
Position
complement(1906060..1908126)
Genome browser
AA seq
688 aa
AA seq
DB search
MSAESVLEGLDPEQRAVAEAVKGPVCVLAGAGTGKTRAITHRIAYATLTGVVTPQRVLAV
TFTTRAAGELRSRLRQLGAPGVQARTFHAAALRQLGYFWPRVVGGEPPKIVDSKIRLVAD
AARACRLTLGRTELRDVASEIEWAKVTQNRPEDYPAAVVKAGRRPPAEVVDVARVYAMYE
QLRRERNLLDFEGMLELTAAVLTEHREVANQVREQYRYFVVDEFQDVNPLQKMLLDTWLG
DRDDLCVVGDPNQTIYSFTGASPSHLLDFTREHPDAKVVRLVRDYRSTPQVVRLANGVIG
QARGARHKLELVAQRDNGPEPVFNEYDDEVAEADDAARRARKLIEEGVPAREIAILYRIN
AQSETYESALAAVGVPYVLRGAERFFERPEVREAVVRLRGAARAGADAETDGMGLIQTVR
HVLSGAGFSDRPPEGAGAARARWESLAALAQLAEDMAADDPAAGLTEFVAELEERTVAQH
APPLEGVTLASLHAAKGLEWDAVFLVGLAEGTLPIIYAKTPEQIEEERRLLYVGVTRARV
HLNLSWALARSPGGTQARRPSRFLDGLTGKATTHTPARVDRTKRRPAKGPQPCRVCGRPL
TAAVERKLGRCEDCPSELNEELLLALKEWRAETAGEQKVPAYVVFTDATLQAIAEHAPES
REDLARIPGVGRVKLDRYGDAVLGLCGH
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgagtcggtgctggagggactggaccccgagcagcgggcggtcgccgaagcg
gtgaagggcccggtctgcgtcctcgcgggcgccgggacgggcaagaccagggccatcacc
caccggatcgcctacgccaccctcaccggcgtcgtgaccccgcagcgggtgctcgccgtg
acgttcaccacacgggcggcgggagagctgcgcagccggctgcggcagctcggcgcgccc
ggcgtgcaggcccgcacgttccacgccgccgcgctgcggcagctcggctacttctggccg
cgcgtcgtcggcggtgagccgccgaagatcgtcgactcgaagatccggctggtcgcggac
gcggcgcgggcgtgccggctcacgctcggccgcacggagctgcgcgacgtcgcgagcgag
atcgagtgggcgaaggtcacccagaaccgccccgaggactacccggccgcggtcgtgaag
gcgggccgccggccgcccgccgaggtcgtcgacgtggcccgcgtctacgcgatgtacgag
cagctcaggcgcgagcgcaacctgctcgacttcgagggcatgctggagctgaccgccgcc
gtcctcaccgagcaccgcgaggtcgccaaccaggtccgcgagcagtaccggtacttcgtc
gtggacgagttccaggacgtcaaccccctgcagaagatgctgctcgacacctggctcggc
gaccgcgacgacctgtgcgtcgtcggcgaccccaaccagacgatctactccttcaccggc
gcgtccccctcccacctgctcgacttcacccgcgagcacccggacgccaaggtcgtcagg
ctcgtccgcgactaccgctcgacgccgcaggtcgtccggctggcgaacggggtgatcggg
caggcgcggggggcgcggcacaagctggagctggtcgcgcagcgcgacaacggtcccgag
cccgtgttcaacgagtacgacgacgaggtcgccgaggccgacgacgccgcccggcgggcc
cgcaagctgatcgaggagggcgtccccgccagggagatcgcgatcctctaccggatcaac
gcgcagtccgagacgtacgagtcggcgctcgcggccgtgggcgtcccgtacgtgctgcgc
ggcgcggagcgcttcttcgagcggcccgaggtgcgcgaggccgtggtccggctgcgcggc
gcggcgcgtgcgggcgccgacgccgagaccgacgggatggggctgatccagaccgtccgg
cacgtcctgagcggcgcggggttctccgaccggccgcccgagggcgcgggcgcggcccgc
gcgcgctgggagtccctggcggcgctggcgcagctcgccgaggacatggccgccgacgac
cccgcggccgggctcaccgagttcgtcgccgagctggaggagcgcacggtcgcgcagcac
gcgccgccgctggagggcgtcacgctcgcctcgctgcacgccgccaaaggcctggagtgg
gacgcggtgttcctcgtcgggctggccgagggcacgctgcccatcatctacgccaagacg
cccgagcagatcgaggaggagcgccgcctcctgtacgtcggcgtgacgcgggcccgcgtg
cacctgaacctgtcgtgggcgctggcgcgctcgcccggcggaacgcaggcgcgccgcccg
tcccgcttcctggacggcctgaccggcaaggccaccacgcacacgcccgcgcgcgtcgac
cggacgaagcggcgtcccgccaaggggccgcagccgtgccgcgtctgcgggcgcccgctg
accgccgccgtcgagcgcaagctcggccgctgcgaggactgcccctccgagctgaacgag
gagctcctcctcgcgctcaaggagtggcgcgccgagacggcgggcgagcagaaggtgccc
gcctacgtggtgttcacggacgcgacgctccaggcgatcgccgagcacgcccccgagtcc
cgggaggacctggcccgcatcccgggcgtcggcagggtcaagctcgaccgctacggcgac
gccgtcctcggcctctgcgggcactga
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