Actinomadura citrea: OG979_10390
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Entry
OG979_10390 CDS
T09741
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
acir
Actinomadura citrea
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acir03021
]
OG979_10390
Transcription machinery [BR:
acir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OG979_10390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Flagellar_rod
LacI
MS_N
Motif
Other DBs
NCBI-ProteinID:
WUR54333
LinkDB
All DBs
Position
2248576..2249505
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AA seq
309 aa
AA seq
DB search
MDIEQPARGERPTADEFRTRNDELFARRHELQDRLSALRARADTGELDMLSELVLRRVER
EFDDLTLEIMIANFGLVRRYVTMFTSKSSEHIEDFESAGKVGLLWAIASYDPNRGPFASW
AFKPIQREVLRAVRDADHPNLNPGDFEKRPAILAAERAFLEEAGPDAPVDHADIARRAGV
TEAQVRRVLDAPRLDSLHTVAGGSGEDDVAWEDRLPDASPSIEDEVLLRFDLRALSSRGL
PLLDPRERYVLTRRFGLDGEPEQALRVIGERLGLSREGVRQIQQKALAKLLQPVVETPEG
ARRIEGRAG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgagcagccagcgcgtggcgagcgccccaccgccgacgagttccgtacccgc
aacgacgaactcttcgccaggcgccacgagctccaggatcggctcagcgcgctccgcgcg
cgggccgacaccggggagctcgacatgctctcggaactggtgctgcggcgggtcgagcgc
gagttcgacgacctcacgctcgagatcatgatcgcgaacttcggtctcgtgcgcaggtac
gtcaccatgttcacctcgaagtcgagcgagcacatcgaggacttcgagagcgccggcaag
gtcggcctgctgtgggcgatcgcctcctacgacccgaaccgcggtcccttcgccagctgg
gccttcaagccgatccagcgggaggtgctgcgcgcggtgcgggacgccgaccacccgaac
ctcaatcccggggacttcgagaagcgcccggccatcctggccgccgagcgggcgttcctc
gaggaggccgggccggacgccccggtcgaccacgccgacatcgcccgccgcgccggggtg
accgaggcccaggtgcgccgcgtgctcgacgccccccggctcgacagcctgcacacggtc
gcgggcggctcgggcgaggacgacgtcgcgtgggaggaccggctgcccgacgcgtccccg
agcatcgaggacgaggtgctgctccgcttcgacctgcgcgccctcagcagccgcggcttg
ccgttgctcgacccccgcgaacggtacgtactgacgcgccggttcggactggacggcgag
ccggagcaggcgttgcgcgtcatcggcgaacgactcgggctgtcccgcgaaggggtgcgg
cagatccagcagaaggcgctggccaagctgctccagcccgtcgtcgagacacccgagggc
gcccggagaatcgagggacgggcaggatga
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