Actinomadura citrea: OG979_12535
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Entry
OG979_12535 CDS
T09741
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
acir
Actinomadura citrea
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acir03016
]
OG979_12535 (thpR)
Enzymes [BR:
acir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
OG979_12535 (thpR)
Transfer RNA biogenesis [BR:
acir03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
OG979_12535 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WUR54736
LinkDB
All DBs
Position
complement(2729635..2730258)
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AA seq
207 aa
AA seq
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MRLFVAIVPPPDVLDELAEAVRPHLGTVSELRWIRRDLMHVTLTFLDEVDDRTLERLLPR
LERAVRRHERMTLSLAGAGAFPGNGAHARVLWTGLYGDRRALARLAASTTAAGRRVGTIP
DKHRGFRPHMTLARSRRPVDVRSLVEALSSFAGMPWTADSVHLMRSHLPGKDNTELAYEP
LMTWPLRHSSGGGGAGRSASGGPQGTP
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttttcgtggcgatcgtcccgccgccggacgtcctggacgagctcgcggaggcc
gtccggccccatctcggcacggtctccgagctgcgctggatccggcgcgatctgatgcac
gtcacgctgacgttcctcgacgaggtcgacgaccgcaccctggagcgcctgcttccgagg
ctggagcgcgccgtccggcgccacgagcggatgacgctgtcgctggcgggcgcgggcgcg
ttccccggcaacggcgcgcacgcccgcgtcctgtggacgggcctgtacggcgaccgccgc
gccctggcgaggctggccgcctccaccaccgccgcgggccgccgcgtcgggacgatcccc
gacaagcaccgcggcttccgcccgcacatgacgctggcgcggtcgcggcgcccggtggac
gtgcggtcgctcgtcgaggcgctgtcatcgttcgcgggcatgccgtggacggcggactcg
gtccacctgatgcgcagccacctgcccggcaaggacaacaccgagctggcgtacgagccg
ctgatgacgtggccgctgcgtcacagctccggcggcggaggggcgggacggtcggcgtcc
ggagggccccaggggacgccgtag
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