Actinomadura citrea: OG979_21055
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Entry
OG979_21055 CDS
T09741
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acir
Actinomadura citrea
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acir03032
]
OG979_21055 (topA)
03400 DNA repair and recombination proteins [BR:
acir03400
]
OG979_21055 (topA)
Enzymes [BR:
acir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OG979_21055 (topA)
DNA replication proteins [BR:
acir03032
]
Prokaryotic type
DNA Topoisomerases
OG979_21055 (topA)
DNA repair and recombination proteins [BR:
acir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OG979_21055 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WUR56329
LinkDB
All DBs
Position
4498370..4501060
Genome browser
AA seq
896 aa
AA seq
DB search
MPAKNGTASSGRGNGAGTRLVIVESPAKAKTIAGYLGRGYIVESSIGHIRDLPGSASEVP
AKYKGEPWAKLGVNVEHGFEPLYVVNSDKRQQVQKLKKLLAEADELFLATDEDREGEAIA
WHLQDVLKPKVPVHRMVFNEITKDAIQRAAANPRQLNMRLVDAQETRRILDRLYGYEVSP
VLWKKVMPKLSAGRVQSVATRLVVERERERIAFVPAHYWDIAAQFDTGKDEEPTAFKAGL
VSVDGRRVAQGRDFGSDGALKTRDALHLDEAAATALAERLRGRPYEVKSVEPKPYTRRPY
PPFRTTTLQQEASRKLNYSAKYTMSVAQKLYENGFITYMRTDSITLSETAITAARRQAAS
LFGGEYVPDKPRVYTSKVKNAQEAHEAIRPAGDSFRTPAETGLSGDQFRLYELIWKRTIA
SQMKDAVGQSVSIRVTGVSTQNERAEFGATGKTITFHGFLKAYVESADDPSTDRDDQERR
LPNLAEGDPLTASAVDAEGHSTRPPARYTEASLVKELEEREIGRPSTYASIIGTILAREY
VFKKGTALVPSFLAFAVVNLLEQHFGNLVDYDFTAHMEDGLDEIARGEAERVRWLTRFYF
GDSGEEGLKELVGDIGDIDAKGISSFPIKGTDIMVRVGRYGPYLDRDGERVNIPEDIAPD
ELTADKAEELFAQPSGDRELGADPETGHTVVAKSGRFGPYVTEILPEPAPPADGKKRTKK
ADAPKPRTSSLFKSMSLDTITLDDALKLLSLPRTLGELDGEPVTAQNGRFGPYIKRGSDS
RSLGSEDELFTVTLDRAKELLAQPKQRGRRAAAAAPLRELGKDPASGEPVVVKEGRFGPY
VTDGETNASLRKGDEIESITIQRAAELLAERREKVAAGGGKKKTAPRRRTSAKSGS
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
gtgccagccaagaacggcaccgcgagcagtggccggggcaacggcgcggggacgcgcctg
gtgatcgtcgagtcgcccgcgaaggcgaagacgatcgccggttacctgggccgcggctat
atcgtggagtccagtatcggccatatccgggacctgcccggaagcgcctcggaggtgccg
gccaagtacaagggcgagccgtgggcgaagctcggcgtgaacgtcgagcacgggttcgag
ccgctctacgtggtcaactccgacaagcgccagcaggtccagaagctcaagaagctgctc
gccgaggccgacgagctcttcctcgcgacggacgaggaccgggagggcgaggcgatcgcc
tggcacctccaggacgtcctgaagccgaaggtccccgtgcaccggatggtcttcaacgag
atcaccaaggacgcgatccagcgcgccgccgcgaacccgcgccagctgaacatgcgcctg
gtggacgcgcaggagacgcgccgcatcctggaccgcctctacgggtacgaggtcagcccc
gtcctgtggaagaaggtcatgccgaagctgtcggcgggccgcgtgcagtcggtggcgacg
cggctggtcgtcgagcgggagcgggagcggatcgcgttcgtccccgcccactactgggac
atcgccgcccagttcgacaccggcaaggacgaggagccgacggccttcaaggccgggctc
gtctcggtggacggcaggcgcgtcgcgcagggccgcgacttcggttccgacggcgcgctg
aagacgcgggacgcgctgcacctggacgaggccgcggcgacggccctcgccgagcggctc
cgcggccgcccgtacgaggtcaagtcggtcgagcccaagccgtacacgcgccgtccgtac
cccccgttccgcacgacgaccctccagcaggaggccagccgcaagctgaactactccgcg
aagtacacgatgtcggtcgcgcagaagctgtacgagaacggcttcatcacctacatgcga
accgactcgatcacgctctcggagacggcgatcacggcggcgcggcggcaggcggcttcg
ctgttcggcggcgagtacgtcccggacaagccgcgcgtctacacgtccaaggtgaagaac
gcgcaggaggcgcacgaggcgatccgcccggcgggcgactccttccgcacccccgcggag
acgggcctgtccggcgaccagttccgcctgtacgagctgatctggaagcggacgatcgcg
tcccagatgaaggacgccgtcggccagtcggtgtcgatccgggtcaccggggtgtcgacg
cagaacgagcgggccgaattcggcgcgaccggcaagaccatcacgttccacggtttcctc
aaggcctacgtggagagcgccgacgacccgtccacggaccgggacgaccaggagcggcgg
ctgccgaacctggccgagggcgacccgctgaccgcgagcgcggtggacgccgaaggccac
tcgacccgcccgccggcccgctacaccgaggccagcctggtcaaggagctggaggagcgg
gagatcgggcggccgtcgacctacgcctcgatcatcgggacgatcctggcgcgcgagtac
gtgttcaagaagggcaccgcgctcgtcccgtcgttcctggcgttcgccgtggtgaacctg
ctggagcagcacttcggcaacctggtcgactacgactttaccgcccacatggaggacggt
ctcgacgagatcgcccgcggtgaggccgagcgcgtccgctggctgacccggttctacttc
ggcgactccggcgaggagggcctgaaggagctggtcggcgacatcggcgacatcgacgcc
aaggggatcagctcgttcccgatcaagggcaccgacatcatggtgcgggtcggccggtac
gggccgtacctcgaccgggacggcgagcgcgtcaacatccccgaggacatcgcgccggac
gagctgaccgccgacaaggccgaggagctgttcgcgcagccgtcgggcgaccgggagctc
ggtgccgaccccgagaccggccacacggtcgtcgccaagtcggggcgcttcggtccctac
gtcaccgagatcctgcccgagccggcgccgccggccgacggcaagaagcggacgaagaag
gccgacgcccccaagccgcgcacgtcgtcgctgttcaagtcgatgtcgctcgacacgatc
acgctcgacgacgcgctgaagctgctgtcgctgccgcgcacgctgggcgagctggacggc
gagccggtgaccgcgcagaacggccggttcggcccgtacatcaagaggggctccgacagc
cggtcgctcggctcggaggacgagctgttcacggtcacgctggaccgggcgaaggagctg
ctggcgcagcccaagcagcgcggccgccgcgccgcggccgcggcgccgctgcgcgagctg
ggcaaggacccggcgagcggggagccggtggtggtcaaggagggccggttcggcccgtac
gtcaccgacggcgagacgaacgccagcctgcgcaagggcgacgagatcgagtcgatcacg
atccagcgcgccgcggaactgctcgcggagcgacgggagaaggtcgccgcgggcggcggg
aagaagaagacggcgccgcgccgtcgaacctccgcaaagtccggttcatag
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