Actinomadura citrea: OG979_23380
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Entry
OG979_23380 CDS
T09741
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
acir
Actinomadura citrea
Pathway
acir00020
Citrate cycle (TCA cycle)
acir00640
Propanoate metabolism
acir00660
C5-Branched dibasic acid metabolism
acir00720
Other carbon fixation pathways
acir01100
Metabolic pathways
acir01110
Biosynthesis of secondary metabolites
acir01120
Microbial metabolism in diverse environments
acir01200
Carbon metabolism
Module
acir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
acir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OG979_23380 (sucD)
00640 Propanoate metabolism
OG979_23380 (sucD)
00660 C5-Branched dibasic acid metabolism
OG979_23380 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
OG979_23380 (sucD)
Enzymes [BR:
acir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
OG979_23380 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
WUR48864
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All DBs
Position
4975912..4976799
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AA seq
295 aa
AA seq
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MAIWLTENSKIIVQGITGSEGTKHGRRMLASGAQVVGGVNARKAGQSVDFDGTTLPVFGT
VAEAMRETGADVSVVFVPPKFTKDAVVEAIDAEIPLCVVITEGIPVHDTAYFWAYAESKG
NKTRIIGPNCPGIASPGKSNAGIIPADITTPGRIGLVSKSGTLTYQMMYELRDIGFSTCV
GIGGDPVIGTTHIDALQAFQDDPETDAIVMIGEIGGDAEERAAAYIEQHVTKPVVGYVAG
FTAPEGKTMGHAGAIVSGSAGTAQAKKEALEKVGVRVGKTPSETAVLMREIMQKS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggccatctggctcaccgagaacagcaagatcatcgtccagggcatcacgggctccgag
ggcaccaagcacggccgccggatgctcgcctccggcgcccaggtcgtcggcggcgtgaac
gcccgcaaggccgggcagtcggtcgacttcgacggcacgaccctcccggtgttcggcacc
gtggcggaggccatgcgggagaccggcgcggacgtctccgtcgtgttcgtgccgccgaag
ttcaccaaggacgccgtggtcgaggcgatcgacgccgagatccccctctgcgtcgtcatc
accgagggcatcccggtgcacgacaccgcctacttctgggcgtacgcggagtcgaagggg
aacaagacccgcatcatcgggccgaactgccccggcatcgcgtcccccggcaagtccaac
gccggcatcatcccggccgacatcacgacccccggccgcatcggcctggtgtccaagtcg
ggcacgctgacctaccagatgatgtacgagctgcgcgacatcggcttctccacctgcgtc
ggcatcggcggcgaccccgtcatcgggacgacccacatcgacgcgctccaggcgttccag
gacgacccggagaccgacgccatcgtgatgatcggtgagatcgggggcgacgccgaggag
cgcgccgccgcctacatcgagcagcacgtgaccaagccggtcgtcggctacgtcgccggg
ttcaccgcccccgagggcaagaccatgggccacgccggcgccatcgtgtccggctccgcc
ggcaccgcgcaggcgaagaaggaggccctggagaaggtcggcgtccgggtcggcaagacc
ccgagcgagaccgccgtcctcatgcgggagatcatgcagaagagctga
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