Actinomadura citrea: OG979_33400
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Entry
OG979_33400 CDS
T09741
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
acir
Actinomadura citrea
Pathway
acir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OG979_33400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acir03400
]
OG979_33400
Enzymes [BR:
acir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OG979_33400
DNA repair and recombination proteins [BR:
acir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OG979_33400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
Helicase_RecD
AAA_22
PhoH
AAA_16
UvrD-helicase
NPHP3_N
UvrD_C
HTH_IclR
HHH_2
nSTAND3
AAA_10
PIF1
NACHT
DEAD
AAA
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
WUR50735
LinkDB
All DBs
Position
7241879..7244119
Genome browser
AA seq
746 aa
AA seq
DB search
MVTVPTSPNPPAAPRPAELEAVLERITYANEDTGYTVARVATAKGGPDLLTVVGALLGAQ
VGESLRLVGRWRSHPKYGKQFEVDSYTTVLPATIQGIRRYLGSGMIKGIGPVMADRMVVH
FGTDILRVIEEEPERLVEVQGLGPKRTRRIGDAWQEQKAIKEVMVFLQGVGVSTSLAVRV
YKQYGDASIDTVRKRPYQLASDVWGIGFKTADTIAQAVGIPHDSPERIKAGLQYTLSEAA
DDGHCFLPEPNLVTAAEKILGVGRELIVPALDELAGEEGVVREPIPGDGEDAATIPAVYL
VPFHRAERSLARGLLELLDAPADRLKAFAGVDWDRALPWLKQRTGQALAPEQEDAVKLAL
TSKVAVLTGGPGCGKSFTVRSVVELAAARHAKIVLVAPTGRAAKRLAELTGREAATVHRL
LQLQPGGDPKFDQDNPLDADLVVVDECSMVDLILANKLVRAVPRGAHLLLVGDVDQLPSV
GAGEVLADLLGAEVVPRVRLTRIFRQAQQSGIVVNAHRVNSGDHPHTRGYPDFFLFPCDE
QDEAAELTVDVVAHRIPRRFGLDPRRDVQVLAPMHRGAAGAGTLNSLLQEKLTPHDDARP
ERRYGGRVFRVGDKVTQLRNNYDKGEAGVFNGTVGVVTSVSLEEQSLTVVTDEDESVDYA
FDELDELAHAYAITIHRSQGSEYPAVVIPLTTGAWMMLRRNLLYTGITRAKKLVVLVGSR
RALAAAVRTAGAGRRHTALAHRLSQR
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccgtgccgacctccccgaacccacccgccgcgccgcgtccggcggagctggag
gcggtgctggaacggatcacctacgccaacgaggacaccggctacaccgtcgcgcgcgtc
gcgaccgccaagggcggtcccgacctgctcaccgtcgtgggcgcgctgctcggcgcgcag
gtgggggagagcctgcgcctggtcgggcggtggcgctcgcatccgaagtacggcaagcag
ttcgaggtcgactcctacacgaccgtcctgccggcgacgatccagggcatccgccgctac
ctcggctccggcatgatcaagggcatcggcccggtgatggccgaccggatggtcgtgcac
ttcggcaccgacatcctgcgcgtcatcgaggaggagcccgagcgcctcgtcgaggtccag
ggcctcggccccaagcgcacccggcggatcggggacgcctggcaggagcagaaggccatc
aaggaggtgatggtcttcctgcagggcgtcggcgtctccacgtccctcgcggtccgcgtc
tacaagcagtacggggacgcctcgatcgacaccgtccgcaagcggccgtaccagctcgcg
tcggacgtgtggggcatcgggttcaagaccgccgacaccatcgcgcaggccgtcggcatc
ccgcacgacagccccgagcggatcaaggcgggccttcagtacacgctgtcggaggccgcc
gacgacgggcactgcttcctgcccgagcccaacctcgtcacggcggcggagaagatcctc
ggcgtcgggcgcgagctgatcgtcccggcgctggacgagctggcgggcgaggagggcgtc
gtccgggagcccatccccggggacggcgaggacgccgcgacgatcccggcggtgtacctc
gtcccgttccaccgggccgagcgctccctggcccgcgggctgctggagctgctcgacgcc
cccgccgaccggctcaaggcgttcgccggcgtcgactgggacagggcgctgccgtggctc
aagcagcgcaccggccaggcgctcgcccccgagcaggaggacgccgtcaagctcgcgctg
acgtcgaaggtggccgtgctgaccggcggccccggctgcggcaagagtttcaccgtccgc
tcggtggtggagctggccgccgccaggcacgccaagatcgtcttggtggcgccgaccggc
cgggccgccaagcggctcgccgagctgaccgggcgcgaggccgcgaccgtgcaccggctg
ctccagctccagccgggcggcgaccccaagttcgaccaggacaaccccctggacgccgac
ctggtcgtcgtcgacgagtgctccatggtcgacctgatcctggccaacaagctggtgagg
gccgtcccgcgcggcgcgcacctgctgctcgtcggggacgtcgaccagctcccgtccgtc
ggcgcgggcgaggtgctggccgacctgctcggcgccgaggtcgtcccgcgcgtccggctg
acgaggatcttccggcaggcgcagcagtcgggcatcgtcgtcaacgcgcaccgcgtcaac
tccggcgaccacccccacacccgcggctaccccgacttcttcctgttcccctgcgacgag
caggacgaggccgccgagctgacggtggacgtcgtcgcccaccgcatcccgcgcaggttc
ggcctcgacccgcgccgcgacgtccaggtcctcgccccgatgcaccgtggcgccgccggc
gccggcacgctgaactccctgctgcaggagaagctgaccccgcatgacgacgcccgtccc
gagcgccgctacggcggccgcgtgttccgcgtcggcgacaaggtcacccagctgcgcaac
aactacgacaagggcgaggccggcgtcttcaacggcaccgtcggcgtcgtcacgtccgtg
tccctggaagagcagtcactgaccgtcgtgaccgacgaggacgagagcgtcgactacgcc
ttcgacgagctggacgagctcgcccacgcgtacgcgatcacgatccaccgctcgcagggc
agcgagtacccggccgtcgtcatcccgctcaccaccggcgcgtggatgatgctgcgccgc
aacctcctgtacaccggcatcacccgggccaagaagctcgtggtcctcgtcgggtcgcgc
cgggccctcgccgccgccgtccgcaccgccggcgcgggccgccgccacaccgccctggcc
caccgcctctctcagcggtag
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