Actinomadura citrea: OG979_34175
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Entry
OG979_34175 CDS
T09741
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
acir
Actinomadura citrea
Pathway
acir03030
DNA replication
acir03410
Base excision repair
acir03420
Nucleotide excision repair
acir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OG979_34175 (polA)
03410 Base excision repair
OG979_34175 (polA)
03420 Nucleotide excision repair
OG979_34175 (polA)
03440 Homologous recombination
OG979_34175 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acir03032
]
OG979_34175 (polA)
03400 DNA repair and recombination proteins [BR:
acir03400
]
OG979_34175 (polA)
Enzymes [BR:
acir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OG979_34175 (polA)
DNA replication proteins [BR:
acir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OG979_34175 (polA)
DNA repair and recombination proteins [BR:
acir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OG979_34175 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OG979_34175 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
XPG_I
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
WUR50880
LinkDB
All DBs
Position
7410526..7413159
Genome browser
AA seq
877 aa
AA seq
DB search
MTDRPRLLLLDGHSLAYRAFYALPVENFTTTSGQPTNVVYGFANMLANVLRDERPSHAAV
AFDVSRQTFRTEEFPEYKATRARSPSEFGSQLPILDRLLAAMSVPVLRAPGYEADDVIAT
LATAAEADGMDVLIVTGDRDVLQLVSDHVTVLYFYRTASEMIRYTPGAVRERYGLTPAQY
PDFAALRGDPSDNLPSIPGIGEKTAAKWVRDYGSLKVLLESAGEVKGKAGEKLRAAADTV
ALNRRLTELVRDLDLPVAPADLRRRPYDLTALTSLLDELEFRNASLRQRLFAADPGGGRP
PEDAEPEPVQGRELGPDELAGWLGSHATGLTGLAADSTWVRGAGDIERIALATGDGKAAS
FEPSGLTAKDERAFAAWLADPGRPKALHDVKALLRVFGERGWHLDGIATDTAMAAYLLLP
GLAAYGIADLAGRHLGRRPSAEGAAGLMLSARAVLDLAGVFAADLASTGMDEVLRDVELP
LSRLLARAERAGVHVEAGLLHELERYFSAGMERAADEAAEIAGRRFNPGSTKQLQEVLFG
ELDLPRTKKIKSGYSTDLDALTWLATRTDNGLPQILLRHRDQARLRSTVAGLIREIGADG
RIHTSFQQTVAATGRLSSADPNLQVIPIRTEEGRRIRRAFTPGEGHASLMTADYGQLELR
VMAHLSQDPTLLAAFASGEDLHTTMAAQVFGARPHAVTPDMRRKIKAMSYGLAYGLSAFG
LARQLGIPVAEARPLMDAYFERLGGVRDYLDHVVAEARATGYTRTVLGRRRYLPHLNSDN
RQRRETAERMALNAPVQGSAADIVKIAMLRVDEALTAAGLASRLLLQVHDEIVLEVAPGE
ADAVREIVRTGMTTAYPLAVGLEVAIGAGPDWNAAAH
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccggccccgcctgctgctcctggacggccactcgctggcctaccgggcgttc
tacgcgctgccggtcgagaacttcaccaccacctccgggcagccgaccaacgtggtgtac
gggttcgcgaacatgctcgccaacgtgctgcgggacgagcgcccctcgcacgcggccgtc
gcgttcgacgtctcccggcagaccttccgcaccgaggagttccccgagtacaaggccacc
cgggcgcggtcgccgagcgagttcggcagccagctgccgatcctggaccggctgctcgcc
gcgatgagcgtgccggtgctgcgggcgcccggctacgaggccgacgacgtcatcgcgacg
ctggcgacggcggcggaggcggacggcatggacgtgctgatcgtcaccggcgaccgggac
gtgctgcagctcgtcagcgaccacgtcaccgtcctgtacttctaccggacggcgtcggag
atgatccggtacacgcccggcgcggtgcgggagcggtacgggctcaccccggcgcagtac
cccgacttcgcggcgctgcgcggcgacccgtccgacaatctgccgagcatccccggcatc
ggggagaagacggccgccaagtgggtccgcgactacgggtcgctgaaggtcctgctggag
agcgcgggcgaggtgaagggcaaggcgggggagaagctgcgcgccgccgccgacacggtc
gcgctgaaccggcggctgaccgagctcgtgcgcgacctggacctcccggtggcgcccgcc
gacctgcggcggcgcccgtacgacctgaccgccctcacctccctgctggacgagctggag
ttccgcaacgccagcctccggcagcgcctgttcgcggcggacccggggggtggacgtccc
ccggaggacgccgagccggagcccgtccaggggcgggagctggggccggacgagctggcc
ggctggctggggtcgcacgcgacgggtctgaccgggctggccgccgactccacgtgggtg
cgcggcgcgggcgacatcgagcggatcgcgctggccaccggcgacgggaaagccgcgtcg
ttcgagccgtccggcctcaccgcgaaggacgagcgggccttcgccgcctggctggccgac
cccggccggcccaaggcgctgcacgatgtgaaggcgctgctgcgcgtgttcggcgagcgc
ggctggcacctcgacggaatcgccaccgacaccgcgatggccgcctacctgctgctgccg
ggcctggccgcctacgggatcgccgacctcgcgggccgccatctcgggcgccgcccgtcc
gccgagggcgcggccgggctgatgctgagcgcccgcgccgtcctcgacctcgccggcgtg
ttcgccgccgacctggcgtccacgggcatggacgaggtcctgcgcgacgtcgagctgccg
ctgtcgcgcctgctcgcccgcgccgagcgcgccggcgtgcacgtcgaggcgggtctcctg
cacgagctggaacggtacttctccgccgggatggagcgcgccgccgacgaggccgccgag
atcgccgggcgccgcttcaaccccggctcgaccaagcagctccaggaggtgctgttcggc
gagctcgacctgccgaggaccaagaagatcaagtcggggtactccaccgacctggacgca
ctgacctggctcgccacccggaccgacaacggcctgccgcagatcctgctgcgccaccgc
gaccaggcgcggctgcgctccacggtcgccgggctcatccgggagatcggcgcggacggc
cgcatccacaccagcttccagcagaccgtcgccgcgaccggccggctcagctccgccgac
ccgaacctgcaggtcatccccatccggacggaagaggggcggcgcatccgccgcgcgttc
acgcccggcgagggccacgcctcgctgatgacggccgactacggccagctcgaactgcgc
gtcatggcgcacctgtcccaggaccccacgctgctggcggcgttcgcgtccggggaggac
ctgcacaccacgatggccgcgcaggtcttcggcgcccgcccgcacgccgtcacgccggac
atgcgccgcaagatcaaggcgatgtcgtacgggctggcctacgggctgtcggcgttcggc
ctggccaggcagctcggcatccccgtggccgaggcgcgcccgctgatggacgcctacttc
gagcggctcggcggcgtccgcgactacctcgaccacgtcgtcgccgaggcccgcgccacc
ggctacacccgcacggtcctcggccgccgccgctacctgccccatctgaacagcgacaac
cggcagcgccgcgagacggccgagcggatggcgctcaacgcccccgtccagggctccgcc
gcggacatcgtcaagatcgcgatgctgcgggtggacgaggcgctcaccgccgccgggctg
gccagccgcctgctgctccaggtgcacgacgagatcgtcctggaggtcgcgcccggcgag
gcggacgcggtgcgggagatcgtccgcaccgggatgacgacggcctacccgctcgcggtc
ggcctggaggtcgccatcggcgccggccccgactggaacgccgccgcccactga
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