Actinomadura citrea: OG979_36830
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Entry
OG979_36830 CDS
T09741
Name
(GenBank) tetratricopeptide repeat protein
Organism
acir
Actinomadura citrea
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
TPR_2
HTH_Crp_2
TPR_1
TPR_8
cNMP_binding
TPR_MalT
AAA_22
TPR_NPHP3
ANAPC5
NB-ARC
TPR_7
ANAPC3
AAA_16
NACHT
HTH_28
TPR_16
WHD_MalT
Crp
AAA_25
nSTAND_NTPase5
TPR_14
HTH_29
TPR_4
nSTAND3
HTH_3
DUF7273
Motif
Other DBs
NCBI-ProteinID:
WUR51379
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Position
8023379..8027188
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AA seq
1269 aa
AA seq
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MIGDDPGVRPGSFWERLAPTDRQALRAMGRRTDIPPGGMLCHQGTVAPAVYVVFKASPRA
ASNAVAKEFVDSSDGDESIIDLFGAGDMVGVLGPWGHPQRATVAALDHVTALRVDRGKFR
SLLAASPQVAEAMMHAVSESVTYGGRRHAVRAADHPQRLAYHLLELAYRFGEPAPGQGTR
IPLRLSQAELANWAGISRETLVRWFRAWRAKGILDQRARPLTVLDVERLRRAASPWGDDW
PAAETERSPEDALGQGAGIAAREPVRLGAPAGPPAVRLPADNPYFAGRVVSLGKLDLLVG
QSVWPRAVVVQGMAGVGKTTLALHWAHRVVDRFPDGVLFADLRGTSRSPVTPAEAMGQVL
RAAGVPGDQVPRTQAELAAQCRSLLGDRRMLLILDNAARPEQIRPLLAAMASGLVVVTSR
RRLPALLEDADVRTLELREMATQEAVDLISNVLGAGDPRLREEDKAVERLARECGHLPLA
LGVMAGRLAENPGESIAGTVRELAARDVRDAAPYGPGLAGAGLGDGAAPGTSGTALLAVL
SPTFDVAYRSLRRGQREAFRRLGLVTGPDFTPTALAALRDGTVGEARECLEGLRQAYLVH
DVGPDRYRMHDLLRDFARERGLREDSDGELQAAQRRLLAGYLAEARHAGDAMAARSRPRA
HPGEAQGRPSAPAERAAGLAWFEAERRNLVAAVYQAARLGLHRTCWELADALFDFQEFRR
YSEDSIAVHQAGLHAARTEEDWAAAAVMLHNLAMAHFELGDSVQAIGYGEDARRGFRAAD
PPDRYGEAATLATLADVHVALGRYLTAIDHARRSLAVHGELQDDAGTAKGHDILARAYLG
LGDYETALDHAAKALDVRRRTQDQPGVAETLLTVAQVHRRQGNVHGAVSHALEALAIRQE
LADMHGAAQALTELARMNAALGLRDLAQQDAEQALRTYRALGARHGEARALTTLGMLMCD
ATRFAEAFTYCGQALRLHRDTSDRHGEAEALAQIGIVHWRLGRYREAREHLLRALEIRRE
IGDQHGEANDLEHLSVVMRRLGRHQEAFVLGLEALDLWHRLGARGGMAGTLGSLARTYSR
LGLPEDAERAARQALGFRESGGDWYGLGVGMDTLAAVLRRAGRPEEALERELEALRILGE
VGDRHSEAVALVHLAAIHLDLGRAGEALATGRCALDLAAELGATREQAHALHGMARASQL
TGEHAGAVEHVTAEIAIRRETDDQRGLRRALELLRDSHLALGDQAAAADCVRRVRALDGL
LAPERPLDV
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgacgacccgggcgtccggccgggcagcttctgggagcggctggcccccacc
gaccggcaggcgctgcgcgccatgggccgccgcaccgacatcccgcccggcggcatgctg
tgccaccaggggacggtcgcgccggccgtctacgtcgtgttcaaggcgtcgccgcgggcc
gcgagcaacgcggtggccaaggagttcgtggactccagcgacggcgacgagtcgatcatc
gacctgttcggcgcgggcgacatggtcggggtcctcggtccgtgggggcatccgcagcgc
gccacggtcgccgcgctggaccacgtcacggcactgcgcgtggaccgcggcaagttccgc
agcctgctggcggcgagcccgcaggtcgccgaggcgatgatgcacgccgtctccgagagc
gtcacctacggcggccgccggcacgcggtgcgggccgccgaccatccccagcggctcgcc
taccacctgctggagctggcgtaccggttcggcgagcccgcccccgggcagggcacgcgg
atccccctgcggctcagccaggcggagctggcgaactgggcggggatctcccgcgagacg
ctggtgcgctggttccgggcgtggcgggccaagggcatcctggaccagcgggcccgcccg
ctgacggtcctcgacgtcgaacggctccgccgcgccgcgagcccctggggcgacgactgg
ccggccgccgagaccgagcgctcgcccgaggacgcgctggggcagggcgccgggatcgcc
gcgcgcgaaccggtgcgcctgggagcgccggccgggccgcccgccgtacgcctccccgcc
gacaacccctacttcgccgggcgcgtggtcagcctcggcaagctcgatctgctggtcggc
cagtccgtgtggccgcgcgccgtcgtggtccagggaatggcgggcgtcggcaagaccacg
ctggcgctgcactgggcgcaccgggtcgtcgaccgcttccccgacggcgtcctgttcgcc
gacctgcgcggcacgtcccgcagccccgtcaccccggcggaggcgatggggcaggtgctg
cgcgcggcgggcgtgcccggcgaccaggtcccgcgcacgcaggcggagctggcggcgcag
tgccggtccctgctcggcgaccgccggatgctgctgatcctcgacaacgccgcccggccc
gagcagatcaggccgctgctggcggcgatggcctccgggctggtggtcgtgacgagccgc
cggcggctgccggccctgctcgaagacgccgacgtccggacgctggaactgcgggagatg
gcgacgcaggaggccgtggacctcatctccaacgtcctcggggcgggcgacccccgtctc
cgggaggaggacaaggcggtcgagcggctcgcccgcgagtgcggccacctgccgctcgcc
ctcggcgtcatggccgggcggctggccgagaaccccggcgagtcgatcgccgggaccgtc
cgggagctggccgcccgggacgtccgggacgccgcgccgtacgggccgggcctcgcgggg
gcgggcctgggcgacggcgcggcgcccggcacgtcggggacggcgctgctggccgttctc
agcccgacgttcgacgtcgcctaccggagcctgcgccgcgggcagcgcgaggcgttccgc
aggctcggcctggtcaccggccccgacttcacgcccaccgccctcgccgccttgcgcgac
ggcacggtcggcgaggcgcgcgaatgcctggaggggctgcgccaggcgtacctggtgcac
gacgtggggccggaccgctaccggatgcacgacctgctgcgcgacttcgcccgcgaacgg
ggtctgcgcgaggactccgacggcgaactccaggcggcgcagcggcggctgctggccggc
tacctcgccgaggcgcgccacgcgggggacgccatggcggcgcggtcccgtccgagggcg
catccgggggaggcgcagggacgtccgtccgcccccgcggagcgcgccgccgggctcgcc
tggttcgaggccgagcggcgcaacctggtcgccgcggtgtaccaggccgcccggctcggc
ctgcaccggacgtgctgggagctcgccgacgcgctgttcgacttccaggagttccgccgc
tacagcgaggacagcatcgccgtccaccaggcgggcctgcacgccgcccgcaccgaggag
gactgggcggccgcggccgtcatgctccacaacctggcgatggcgcacttcgagctgggc
gactccgtccaggccatcggatacggggaggacgcgcggcgcgggttccgggccgccgac
ccgcccgaccgctacggggaggccgccaccctggccaccctggccgacgtccacgtggcg
ctggggcgctacctgacggcgatcgaccacgcgcggcgctccctcgccgtccacggggag
ctgcaagacgacgcgggaacggccaagggccacgacatcctggccagggcatacctgggc
ctcggcgactacgagacggctctggaccacgccgccaaggcgctcgatgtccgccgccgt
acgcaagaccaaccgggagtggccgagaccctgctcaccgtggcccaggtacaccgccgc
caagggaacgtccacggcgcggtctcgcacgctctggaggcgctcgccatccggcaggaa
ctcgccgacatgcacggcgccgcgcaggcgctgaccgagctcgcgcggatgaacgccgcg
ctcggcctgcgcgacctggcgcaacaggacgccgagcaggcgctgcgcacctaccgcgcc
ctcggcgcccgccacggggaggcgcgggcgctgaccacgctcggcatgctcatgtgcgac
gcgacgcggttcgccgaggcgttcacctactgcgggcaggcgctgcggctgcaccgcgac
accagtgaccgccacggcgaggccgaggcgctcgcgcagatcgggatcgtccactggcgc
ctcgggcggtaccgcgaggcgcgcgagcacctcctgcgcgccctggagatccgccgcgag
atcggcgaccagcacggcgaggccaacgacctggagcacctgtcggtggtgatgcggcgc
ctcggccgccaccaggaggcgttcgtcctcggcctggaggccctggacctgtggcaccgg
ctcggcgcgcggggcgggatggccggcacgctcggcagcctggcccgcacgtactcgcgg
ctcggcctgcccgaggacgccgagcgcgccgcccggcaggcgctgggcttccgcgagtcc
ggcggcgactggtacggcctcggcgtcggcatggacaccctcgccgccgtgctgcgccgc
gccggccgtcccgaggaggccctggagcgggagctggaggcgctgcgcatcctcggcgag
gtcggcgaccggcacagcgaggccgtcgccctggtccacctcgccgccatccacctcgac
ctcggccgcgccggcgaggcactcgcgaccgggcggtgcgccctcgacctcgccgccgag
ctcggcgccacccgcgagcaggcccacgccctgcacggcatggcccgcgcgtcccagctg
accggcgagcacgccggcgcggtggagcacgtcaccgccgagatcgccatccgccgcgag
accgacgaccagcggggcctgcggcgggcgctggagctgctgcgcgactcccacctggcc
ctcggcgaccaggccgcggccgcggactgcgtccgccgcgtccgcgccctggacggcctg
ctcgccccggaaagaccgctcgacgtgtga
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