Acidovorax carolinensis P3: CBP35_04360
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Entry
CBP35_04360 CDS
T04998
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
acis
Acidovorax carolinensis P3
Pathway
acis03030
DNA replication
acis03410
Base excision repair
acis03420
Nucleotide excision repair
acis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBP35_04360
03410 Base excision repair
CBP35_04360
03420 Nucleotide excision repair
CBP35_04360
03440 Homologous recombination
CBP35_04360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acis03032
]
CBP35_04360
03400 DNA repair and recombination proteins [BR:
acis03400
]
CBP35_04360
Enzymes [BR:
acis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBP35_04360
DNA replication proteins [BR:
acis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CBP35_04360
DNA repair and recombination proteins [BR:
acis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CBP35_04360
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBP35_04360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
SSO1393-like_WHD
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
ART54463
UniProt:
A0A240UFV3
LinkDB
All DBs
Position
927078..929876
Genome browser
AA seq
932 aa
AA seq
DB search
MSDKKTLLLVDGSSYLYRAFHAMPDLRAVPGDPASPATGAIRGMINMMQALRKEVHADYA
ACVFDAKGPTFRDAIYPAYKQQRNPMPDDLRAQIPPIHEVVRLMGWKVLDVPGVEADDVI
GTLAVTAARQGIEVVVSSGDKDLAQLVDEHITIIDTMNGKRRDVAGVEAEFGVPARLMVD
FQTLVGDQVDNVPGVEKVGPKTAAKWLQEYGSLDAVVASADKIKGVAGENLRKALDWLPT
GRQLLTIKTDCDLNGWVEGLPSLDAITIGAPDAPRLKDFYEQYGFKGLARALGDATSSAP
VAATPAVAMPGQSGDLFADHSASPVAEAAQHRAVVYDTILNWTDFDHWLQRLQKAELVAL
DTETTSLDEMRAEIVGISFSVQPGEAAYIPLAHAGPDAPAQLPRDEVLARLAPWLEDGKR
HKLGQHIKYDRHVFANHGIEVRGYVHDTMLQSYVLEVHKPHNLTSLAERHTGRTGISYED
LCGKGAHQIPFAQVPVDKAAAYSCEDSDQTLDVHNALWPLLQADDKLRFIYELEIASSEA
LFRIERNGVLIDAPTLAAQSHELGQRIVQLETDAYAIAGQPFNLSSPKQLGEIFFDKLGM
PVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLVKLKGTYTDKLAQLALPRTGRVH
THYAQAVAVTGRLSSNDPNLQNIPIRTAEGRRIREAFVAPAGCVIASADYSQIELRIMAH
LSGDHALLHAFHAGLDVHRATAAEVFGVALDQVTSEQRRYAKVINFGLIYGMSSFGLAKN
LGIETKAAAAYIDRYFQRYPGVKQYMDETKAAAKSMGYVETVFGRRLYLPEINSPNGPRR
AGAERAAINAPMQGTAADLIKMAMVAVQKEVDAHQPGIKMIMQVHDELVFELPEGDVDWL
KSHIPRLMAEVAALKVPLLAEVGVGPNWDKAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaaaaagaccctgctgctggtggatggctccagctacctctaccgcgccttc
cacgccatgcccgacctgcgcgccgtgcccggcgatccggccagccccgccacgggcgcc
atccgcgggatgatcaacatgatgcaggcgctgcgcaaagaggtgcatgccgactacgcc
gcctgcgtgttcgacgccaagggccccaccttccgtgacgccatctaccccgcctacaag
cagcagcgcaaccccatgcccgacgacctgcgcgcgcaaatcccgcccatccacgaggtg
gtgcgcctgatgggctggaaagtgctcgacgtgcccggcgttgaggccgacgacgtgatc
ggcacgctggccgtgaccgcggcgcgccagggcattgaggtggtggtcagcagcggcgac
aaggatctggcgcagctggtggacgagcacatcaccatcatcgacaccatgaacggcaag
cgccgcgatgtggccggcgtggaggccgagttcggcgtgcccgcgcggctgatggtggat
tttcagaccctggtgggcgaccaggtcgacaacgtgcccggtgtggaaaaggtgggcccc
aagacggccgccaagtggctgcaggaatacggctcgctcgacgccgtggtggccagcgcc
gacaagatcaagggcgtagccggcgagaacctgcgcaaggcactcgattggctgcccacg
ggccgccagttgctcaccatcaagacagactgcgacctgaacggctgggttgagggcctg
ccgtcgcttgacgccatcaccatcggcgcgcccgatgcgccccggctcaaggatttttac
gagcaatacggcttcaagggcctggcgcgcgctctgggcgatgccacgtcttcggcccca
gtggcggccacgcccgccgtggccatgccgggccaaagcggcgacctgtttgccgaccat
tccgccagccccgtggccgaggcagcgcagcaccgcgcggtggtgtacgacaccatcctg
aactggaccgactttgaccactggctgcagcgcctgcaaaaggccgagctggtggcgctg
gataccgaaaccacctcgctcgacgaaatgcgcgccgaaatcgtcggcatcagtttcagc
gtgcagcccggcgaggccgcctacattccgctggcccacgccgggccggatgcccccgcg
cagctgccgcgcgatgaagtgctggcgcgcctggcgccctggctggaagacggcaagcgc
cacaagctgggccagcacatcaagtacgaccgccatgtgttcgccaaccacggcatcgag
gtgcgcggctatgtgcacgacaccatgctgcaaagctatgtgctggaagtgcacaagccg
cacaacctcaccagcctggccgagcgccacaccggccgcaccggcatcagctacgaagac
ctgtgtggcaaaggcgcgcaccagattccgtttgcccaggtgccggtcgataaagctgcg
gcctattcgtgcgaggactcggaccagacgctcgatgtgcacaacgcgctgtggccgctg
ctgcaggccgacgacaagctgcgcttcatctacgagctggaaatcgccagcagcgaggcg
ctgttccgcatcgagcgcaacggcgtgctcatcgacgcacccacgctggccgcgcaaagc
catgagctgggccagcgcatcgtgcagctcgaaaccgatgcctatgcgattgccggccag
cccttcaacctcagcagccccaagcagctgggcgaaatcttcttcgacaagctgggcatg
cccgtggtcaagaagaccgccaccggcgcgcgcagcaccgacgaagaggtgctggaaaaa
ctggccgaggactatccgctgcccgccaagctgctggagcaccgcagcctggtcaagcta
aaaggcacctacaccgacaagctcgcccaactggcgctgccgcgcaccggccgcgtgcac
acgcactatgcgcaggccgtggccgtaaccgggcggctgtccagcaacgaccccaacctg
cagaacatccccatccgcacggccgagggccggcgcatccgcgaagcctttgtggcgccc
gccggctgcgtgatcgccagcgccgactacagccagatcgagctgcgcatcatggcccac
ctctcgggcgaccatgcgctgctgcacgccttccacgccggcctggatgtgcaccgcgcc
accgccgccgaagtgtttggcgtggcgctggaccaggtgacgagcgagcagcgccgctac
gccaaggtcatcaactttgggctcatctacggcatgagcagctttggcctggccaagaac
ttagggatagagaccaaggccgccgccgcctacatcgaccgctacttccagcgttacccc
ggcgtgaagcagtacatggacgaaaccaaggccgccgccaaatccatgggctatgtcgag
acggtatttggccggcgcctttacctgcccgaaatcaactcgcccaacggcccgcgccgc
gccggcgccgagcgcgccgccatcaacgcgcccatgcagggcacggcggccgacctcatc
aagatggccatggtggcggtgcaaaaagaagtcgatgcgcaccagcctggcatcaagatg
atcatgcaggtgcacgacgaactcgtgttcgagttgcccgagggcgacgtggactggctc
aagagccacatcccgcgcctgatggccgaggtggcagcgctcaaggtgcccctgctggcc
gaggtgggcgtggggccgaactgggacaaggcgcattga
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