Acidovorax carolinensis P3: CBP35_08795
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Entry
CBP35_08795 CDS
T04998
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
acis
Acidovorax carolinensis P3
Pathway
acis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBP35_08795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acis03400
]
CBP35_08795
DNA repair and recombination proteins [BR:
acis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBP35_08795
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CBP35_08795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_25
Kinesin
UB2H
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ART55091
UniProt:
A0A240UDG1
LinkDB
All DBs
Position
1902975..1905065
Genome browser
AA seq
696 aa
AA seq
DB search
MPDITEVITEKQDGEFVHFPNSPFELFQPYPPAGDQPEAINKLVEGLNDGETFQTLLGVT
GSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSAINEHIEQMRLSCTKSLMERTDVVIVATVSAIYGIGEPESYHRMVMTL
RTGDKLGQRDVIAQLIRMQYQRNEADFSRGKFRVRGDTIDVFPAEHSELAIRIELFDDEI
ESLQLFDPLTGRVKQKIPRFTVYPSSHYVTPRDKVLAAVETIKIELADRLQQLLADGKLV
EAQRLEQRTRFDLEMLSEVGHCKGIENYTRHLSGAAPGDPPSTLTDYMPKNAIMFLDESH
QMIGQLNAMYSGDRSRKTTLVEYGFRLPSALDNRPLKFEEFEQRMRQVIFVSATPADYEK
THSGQIVDQVVRPTGLVDPEVEVRPATHQVDDVLQEIRIRAEKHERVLITTLTKRMAEQL
TDYLTDNGVKVRYLHSDVDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRAERSLIQTIGRAARNLNGRAILYADRITESMKKAMGETERRRIKQIAHNEVH
GITPRSIVKRVRDLIDGVYSEKAGKDAERLEQEALQRAKVEDMSEKDVAREIKRLEKQML
EHARNLEFEQAARVRDQLTRLKDQAFGAHGNDSVAL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccggatatcacagaagtcatcacggaaaagcaagacggcgaattcgtccattttccc
aattccccctttgagctgttccagccctacccgccagcaggcgaccagcccgaggccatc
aacaagctggtcgagggcctgaacgacggcgaaactttccagactctgctgggcgtgacg
ggctcgggcaagaccttcaccatggccaacgtgattgcccgcatgggtcgcccggccatc
gtgttcgcgcccaacaagacgctggccgcgcagctttacagcgagttccgcgagttcttt
ccgaagaacgcggtcgaatacttcgtcagctactacgactactaccagcccgaggcttat
gtgccgcagcgcgacctgttcatcgagaaggacagcgccatcaacgagcacatcgagcag
atgcgcctgtcgtgcaccaaaagcctgatggagcgcacggatgtggtcatcgtggccacc
gtgtcggccatctacggcattggcgagcccgagagctaccaccggatggtgatgacgctg
cgcaccggcgacaagctgggccaaagggacgtgattgcccagctcattcgcatgcagtac
cagcgcaacgaggcggatttctcgcgcggcaagttccgcgtgcgcggagacaccatcgac
gtgttcccggccgagcactcggagctggcgattcgcatcgagctgtttgacgacgagatc
gagagcctgcagctgtttgacccgctcaccggccgcgtcaagcagaagatcccgcgcttt
accgtgtaccccagcagccactatgtgacgccgcgcgacaaggtgctggcggcggtggag
accatcaagatcgaattggccgaccgcctccagcaattgctggccgacggcaagctggtg
gaggcgcagcggctggagcagcgcacacgctttgacctggagatgctcagcgaagtcggg
cactgcaagggcattgagaactacacgcgccacctgtcgggcgcggcgccgggcgacccg
ccgagcacgctgaccgactacatgcccaagaacgcgatcatgttcctggatgaaagccac
cagatgatcggccagctcaacgccatgtacagcggcgaccgctcgcgcaagaccacgctg
gtcgaatatggctttcgcctgccttcggcgctggacaaccggccgctgaagttcgaggag
tttgagcagcgcatgcggcaggtgatttttgtatcggccacaccggccgactacgagaag
acccactcaggccagatcgtcgaccaggtcgtgcggcccacgggcctggtggacccggag
gtggaggtgcgccccgccacacaccaggtggacgatgtgcttcaagaaatacgcattcgc
gctgaaaagcacgagcgcgtactcatcaccacgctgaccaagcgcatggcggagcagctg
accgattacctgacggacaacggcgtgaaggtgcgctacctgcacagcgacgtggatacg
gtggagcgcgtggaaatcatccgcgacctgcggctgggggcgtttgacgtgctggtgggc
atcaacctgctgcgcgaggggttggacattcccgaggtgtcgctggtggccattctcgat
gcggacaaggagggctttttgcgggccgagcgcagcctgatccagaccattggccgtgcg
gcgcgcaacctcaatggccgggccattctgtatgcggaccgcattaccgaatccatgaaa
aaagcgatgggcgaaacggaacgccggcgcatcaagcagatcgcacacaacgaggtccac
gggattacgccgcgcagcattgtcaagcgggtaagagacctgattgacggcgtttacagc
gagaaagccggcaaggacgccgagcggctggagcaggaagccctgcagcgtgccaaggtg
gaggacatgtccgagaaagacgtggcgcgcgagatcaaacggctggaaaaacagatgctg
gagcatgcgcgcaacctcgaattcgagcaggcagcccgcgtgcgtgaccagttgacgcgg
ctcaaggaccaggcttttggagcgcatggcaacgattcggtagcgctctga
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