Acidovorax carolinensis P3: CBP35_16325
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Entry
CBP35_16325 CDS
T04998
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
acis
Acidovorax carolinensis P3
Brite
KEGG Orthology (KO) [BR:
acis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acis03009
]
CBP35_16325
Enzymes [BR:
acis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CBP35_16325
Ribosome biogenesis [BR:
acis03009
]
Prokaryotic type
rRNA helicases
CBP35_16325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ART56167
UniProt:
A0A240U9V7
LinkDB
All DBs
Position
complement(3533133..3534542)
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AA seq
469 aa
AA seq
DB search
MTSKENAASTDFSALALSPATLANLQQLGYMQMTPIQAASLPPALLGKDLIAQASTGSGK
TAAFALALLANLNPRRFAVQALVLCPTRELADQVTSEIRRLARAEENIKVVTLCGGVPLR
AQTLSLEHGAHIVVGTPGRVMDHLERQHLSLEALNTLVLDEADRMLDMGFFDDIATVARQ
CPKERQTLLFSATYPEGIAKLSAQFMKTPVQITVQAQHAEGKIEQRWYEVKNSERLHAVS
QLLNHFRPESSIAFCNTKQQCRDLVGVLQAQGFSALALYGELEQRERDQVLVQFANKSCS
VLVATDVAARGLDIANLAAVINVDVTPDPEVHIHRIGRTGRGDAEGLALNLASMDEMGSV
GKIEVLQGRESRWFPVAELTPTGSGPLVPPMVTIQIIGGRKEKIRAGDVLGALTGEMGYT
REQIGKINVNDFSTYVAVDRAMGAQAAQRLNNGRVKGKTVKARLVTGDE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacttccaaagaaaacgccgccagcactgatttcagcgcgctggccctgagcccggcc
acgttggccaatttgcagcagctgggctacatgcagatgacgcccatccaggcggccagc
ctgccccccgccttgctgggcaaggatttgatcgcccaggccagcaccggcagcggcaag
actgctgcatttgcgctggccctgctggccaacctcaatccccgccgttttgcggtgcag
gccctggtgctgtgccccacgcgcgagctggcagaccaggtgacctccgaaatccgccgc
cttgcgcgcgccgaagaaaacatcaaggtcgtgaccctgtgcggcggcgtgccgctgcgc
gcccagacgctgagcctggagcatggggcgcacattgtggtgggcacccccggccgcgtg
atggaccatctggagcgtcagcacctttcgctcgaagcactcaacaccctggtgctcgac
gaggctgaccgcatgctcgacatgggcttcttcgacgacattgccaccgtggcgcgccag
tgccccaaggagcggcagacgctgctgttctcggccacctaccccgaaggcatcgccaag
ctgagtgcccagttcatgaaaacgccggtgcagatcacggtgcaggcccagcatgccgag
ggcaagatcgagcagcgttggtacgaggtgaaaaacagcgagcgcctgcatgcggtgtcg
caactgctcaaccacttccgccccgagtcgtcgattgccttttgcaacaccaagcagcaa
tgccgtgacctggtgggcgtgctgcaggcgcagggctttagtgcgctggcgctctatggc
gagttggagcagcgcgagcgcgaccaggtgctggtgcagtttgccaacaagagctgctcg
gtgctggtggccaccgatgtggcggcgcgcgggcttgacatcgccaacctggcagcagtc
atcaatgtggacgtgacgcccgaccccgaagtgcacatccaccgcatcggccgcaccgga
cggggtgacgccgaaggtctggcgcttaacctggccagcatggacgagatgggctctgtg
ggcaagatcgaggtgctgcagggacgcgagtcgcgctggttcccggtggccgaactcaca
cccacgggcagcggcccgctggtgccgcccatggtcaccatccagatcatcggtggccgc
aaggagaagatccgtgcgggcgacgtgctgggcgcgctgacgggcgagatgggctacacc
cgcgagcagatcggcaagatcaacgtgaacgacttttccacctacgtggcggtggaccgc
gccatgggtgcccaggccgcccagcgcctgaacaacggccgcgtcaagggcaagaccgtg
aaggcgcggctggtgacgggcgacgaatga
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