Acidovorax carolinensis P3: CBP35_19590
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Entry
CBP35_19590 CDS
T04998
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acis
Acidovorax carolinensis P3
Pathway
acis03410
Base excision repair
acis03430
Mismatch repair
acis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CBP35_19590
03430 Mismatch repair
CBP35_19590
03440 Homologous recombination
CBP35_19590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acis03400
]
CBP35_19590
DNA repair and recombination proteins [BR:
acis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CBP35_19590
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CBP35_19590
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CBP35_19590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ART57118
UniProt:
A0A240UJH7
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All DBs
Position
pACP3.1:complement(115718..117688)
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AA seq
656 aa
AA seq
DB search
MSSPVILQKRPANPIAVARMRARGVDEILARLYVSRGITESSEISGGMSDLLPGDSMKNV
TAMACYLADCAVTHKRVLIVSDYDCDGATACAVLAMAFMGCGMNYEYLVPDRMKHGYGLT
PAIVDEAAALATRPDVIITVDNGISSHAGVQRANEHGIDVLVTDHHLAPDVLPNAKLIVN
PNQKGCTFESKNIAGCGVAWYVARALIEELIARNMDPGFEPGELLSYVALGTVADVVKLD
RNNRILVAEGLKYIRSRQCAPGVLALASIAGKNITSLTCSDIGFGIGPRINAAGRLAHMS
AGIECLTTLEIGTAIELAKQLNETNEERKEIQREIAEGAIVQAFNLLAMQSDEPSDEFGR
RSIVVYSPDWHEGVVGVVAGRLKEDLHRPTIVMTNAADGDIKGSARSIPGFHLKHALDEI
NIKHPGVLLKFGGHAMAAGMTIVGDKIDLFRNAFEAVCRKHLTAEIMVKRLSHDGELPEH
LFTVDTIYNLSQQVWGAGFEEPVFVNTFAVDEIKTIGEDQAHLRLKARLGSTCTDVLAFG
QGDMAMAVGPTITVAHKPQINTFQDDRTLQSLVELMPESLNPGMAEVLSERAAKIHEAAA
ARAVTQTQSLPPSSPALVEAAHVAEIPAEKASPAPAMNETPAKVRRPAPSRMSMSR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacccgtcatcctccaaaagcgtccagcaaacccaatcgccgtcgcgcgcatg
cgggcgcgcggggttgacgagatccttgcccggctttacgtttcgcgcggcatcaccgag
tcctcggagatctctggaggcatgagtgatttgctcccgggcgactccatgaagaatgtc
acggccatggcttgctatctggctgactgtgcagtcacgcacaagcgggttctgatcgtt
tcggattacgactgtgacggggccaccgcctgtgccgttctcgcgatggccttcatgggg
tgcggcatgaactacgaatacctcgtgccggaccgaatgaagcatggctatggcctgacg
ccggccatcgtggatgaggctgcggcgctggccacgcgcccggacgtcatcatcaccgtg
gacaacggcatcagctcccatgcaggtgtgcagcgggccaacgaacacggcatcgatgtg
ctggtgacggatcaccacctggcccccgatgttctcccgaatgccaagctgatcgtgaac
cccaaccaaaagggctgcacgttcgagtccaagaacatcgcaggatgcggggtggcctgg
tatgtggcgcgcgccttgatcgaagagctcatcgcacgcaacatggacccgggatttgag
cctggcgagttgctgagctatgttgctctcggcacggtcgccgacgtcgtgaagcttgat
cgaaacaaccgcattcttgtcgccgagggcctgaagtacatccgcagccgccagtgcgca
ccaggcgttctggcgctcgccagcattgccgggaagaacatcacaagtctgacctgttcc
gacattgggtttggcattgggccccgcatcaacgctgcaggccgcctggcgcacatgagc
gccggcatcgagtgcctcacgacccttgaaattggcactgcgatcgagttggccaagcag
ctcaatgagaccaacgaagagcgcaaggagatccagcgagaaatcgccgaaggggccatc
gtgcaggcattcaacctgctcgcgatgcagtccgacgagccatcggatgaattcgggcgc
cgctcaattgttgtctacagccctgattggcacgaaggcgtcgttggagtcgtcgccggg
cgcctgaaggaagatcttcaccgacccaccatcgtcatgaccaatgcggccgatggcgat
atcaagggctcggcgcggtcgatcccgggttttcacctcaagcacgcgctggatgaaatc
aacatcaagcatcccggtgtcctgttgaaattcggtggccacgccatggctgccggcatg
accatcgtcggggacaagatcgaccttttccgcaacgctttcgaggccgtctgcaggaaa
cacctgacggccgagatcatggtcaagcggctcagccacgatggcgagctgcccgagcac
ctgttcactgtcgacaccatctacaacctcagccagcaggtatggggtgccggctttgaa
gagccagttttcgtcaacacctttgcggtggacgaaatcaaaaccatcggcgaggaccag
gcacacctgcgcctcaaggcccgactggggtcaacctgcactgatgtgctcgccttcggc
caaggcgatatggcgatggctgtgggccccaccatcacggttgcccacaagccccagatc
aacaccttccaggacgaccgcaccctgcaatcgctggtcgaactcatgcccgagtccctc
aatcccggcatggccgaggttttgagcgagcgcgcggccaagatccacgaagccgccgcc
gcgcgcgccgtgacgcaaacgcagagcctcccaccaagtagccccgcgcttgtggaggcg
gcgcatgtcgcagaaatcccggcggagaaggcaagcccggctccagccatgaatgagaca
ccggccaaggtgcgccgcccggccccctcgcgcatgtcaatgagcaggtga
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