Arthrobacter citreus: HPK19_01135
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Entry
HPK19_01135 CDS
T06606
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
acit
Arthrobacter citreus
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acit03019
]
HPK19_01135
03009 Ribosome biogenesis [BR:
acit03009
]
HPK19_01135
Enzymes [BR:
acit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPK19_01135
Messenger RNA biogenesis [BR:
acit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPK19_01135
Ribosome biogenesis [BR:
acit03009
]
Prokaryotic type
rRNA helicases
HPK19_01135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
PRAI
CMS1
Motif
Other DBs
NCBI-ProteinID:
QKE71489
LinkDB
All DBs
Position
225556..226863
Genome browser
AA seq
435 aa
AA seq
DB search
MAISFKDYQLKPFILEAIEKKHFTEPTEIQQKIIPQVKTGRSVIGQSQTGSGKTHAYLIP
TINTLDPSVDQVQLVITAPTRELATQIYNDVQAIIECCPEDQQLTAKNFVGGTDYKRTVE
KLKKQPHIVIGTTGRIKDLVNDNVLLVHTTKYLVVDEADLMLDMGFIHDVDQVASKMPKK
LQMLVFSATIPEKLKPFLKKYMENPEHIHINPKQLSAQKIEHIIVPSRHKDKVKMAKDIL
LSFQPYLAIIFTNTKKKAEEVATQLSSYGLKVGQIHGDLSPRERKKMMKQIQDLEFQYIV
ATDLASRGIDIEGVSHVVNIELPADLDFYVHRVGRTGRANFDGTAITIYDQEDDQALDKL
QERGITFEHRELKKGEWVDLGPRAKRKLRKRTDRNLDAVANKTIKKPSKVKPGYKRKLND
QRESFKNRLKRKSER
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttcatttaaagattatcaattaaaaccatttattttggaagcgatagagaag
aaacactttacagaaccaacagaaattcaacaaaagattatacctcaagttaaaactgga
cgtagtgtgataggtcaatcgcaaacagggtcaggaaagactcatgcataccttattccg
acaattaatacattagatccatctgtcgatcaagtgcaattagtaattactgctccaacg
cgtgaattagcaactcaaatttataacgatgttcaagcgattattgaatgctgtcctgag
gatcagcaattaactgctaaaaacttcgttggtggtaccgactacaaacgtactgttgaa
aaactaaaaaaacaaccgcatattgtgatcggtacaacaggtcgtattaaagacttagta
aatgataatgttttattagttcatactacgaaatatttagtagtagatgaagctgattta
atgttagatatgggattcatccatgatgtggaccaagttgcatcaaaaatgccaaagaaa
ttacaaatgcttgttttttctgcgacaattcctgaaaaacttaaaccattcttgaaaaag
tacatggaaaatcctgaacatattcatattaatccaaaacaactttctgctcagaaaatt
gaacatatcattgttccaagtcgtcataaagataaagttaaaatggcaaaggatatttta
ttaagttttcagccttatttagcaattatctttacgaatacaaagaaaaaagcagaagaa
gttgcgactcaattatcatcatatggcttaaaagttggtcaaattcatggagatttaagt
cctcgtgaacgtaaaaaaatgatgaaacaaatccaagacttagagttccaatatattgtt
gctactgatttagcatcacgaggcattgatattgagggtgtaagtcatgttgttaatatc
gaattacctgcagatttagacttttatgttcaccgtgtaggtcgtacaggtcgtgcaaac
tttgatggaactgcgattactatttatgatcaagaagatgaccaagccttagacaagctt
caagaacgcggaattacttttgagcatcgcgaacttaaaaaaggtgagtgggttgattta
ggtccacgcgctaaacgtaagcttcgtaaaagaacagatcgcaatttagatgctgttgca
aataaaacaattaaaaagccttcgaaagtaaaaccaggctacaagcgtaaactgaacgac
caaagagaatcttttaaaaatagattaaagcgaaaaagtgaaagataa
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