Arthrobacter citreus: HPK19_01140
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Entry
HPK19_01140 CDS
T06606
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
acit
Arthrobacter citreus
Pathway
acit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPK19_01140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acit03400
]
HPK19_01140
Enzymes [BR:
acit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HPK19_01140
DNA repair and recombination proteins [BR:
acit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HPK19_01140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QKE71490
LinkDB
All DBs
Position
227069..227962
Genome browser
AA seq
297 aa
AA seq
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MLRIGSHVSMSGKKMFLAASEEAASYGANTFMVYTGAPQNTRRKALEDLNIEAGLKHMAE
NGIADIIVHAPYIINIGNTTNPATYELGVEFLQKEIDRTAALGAKQIVLHPGAHVGAGED
AGIDRIIQGLNEVLTTDTPVQIALETMAGKGSECGKSFEEIARIMEGVHYSDKLSVCFDT
CHINDAGYDIVNDFDGVLQQFDHLIGIDKIKVLHINDSKNPMGSRKDRHENIGFGTIGFK
ALNYIVHHPQLMEVPKILETPYVGEDKNSKVAPYKLEIEMLRNQEFNENLVQELMKA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttacgaattggatctcatgtttctatgagcgggaaaaagatgtttttagccgctagt
gaagaagcagcaagttatggtgcaaatacatttatggtatacacaggtgcaccccaaaat
acacgtcgtaaagcacttgaagatttaaatattgaagcaggtttaaaacatatggctgaa
aatggaattgctgatattattgtccatgcaccatatattattaatattggtaatacaaca
aatccggctacttatgagctaggcgttgaatttttacaaaaagaaatagaccgtacagca
gcattaggagcaaaacaaatcgtattgcatccaggtgctcatgtcggcgcaggtgaagat
gctggtattgatcgaattattcaaggtttaaacgaagtattaaccacggatactccagta
caaatcgcgcttgaaacaatggcaggaaaaggctcagaatgtggtaaatcattcgaggaa
atagcgagaattatggaaggggttcattacagcgataaactatcagtttgttttgacaca
tgccatataaatgacgctggatacgatattgtgaatgattttgatggtgtcttgcaacaa
ttcgatcatttgattggtatcgataaaataaaagtactacatattaatgacagtaagaat
ccaatgggtagtcgtaaagaccgacacgaaaacattggttttggaacgatcggatttaaa
gcattaaactatatcgttcatcatccacaattaatggaagttcctaaaatattagaaaca
ccatatgttggtgaagataaaaatagtaaagtggcaccttataaattagaaattgaaatg
ttacgcaatcaggaattcaatgaaaatttagttcaggaattaatgaaagcttaa
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