Arthrobacter citreus: HPK19_05350
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Entry
HPK19_05350 CDS
T06606
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
acit
Arthrobacter citreus
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acit03016
]
HPK19_05350
Enzymes [BR:
acit01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
HPK19_05350
Transfer RNA biogenesis [BR:
acit03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
HPK19_05350
Prokaryotic type
tRNA splicing ligases
HPK19_05350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QKE72260
LinkDB
All DBs
Position
1014852..1015970
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AA seq
372 aa
AA seq
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MIEFNGKYNNGKILLDYVDTNVITQLKTILDTECFSNSNIVVMPDCHISSGGVMVGFTMT
LNDYIIPSIVGVDIGCGVSAYYLGRMKTVKSEKLDKFIRKNIPIGSNIHDEPVIEPEEIA
EAIERLGLNYNYVMSSIATLGGGNHFIEIDKDENNHFWLVIHTGSRHFGFEIAKHHMNVA
KENMKQLFGENYKGFEYLSKKEDKDAYLKDLSIAQHFASLNREQIAKIIIGKYFKLDFDG
IRKIESIHNYIDLKNNILRKGAISATEGEEVIIPFNMAFGCAVGKGKSSGDYNFSAPHGA
GRIMSRTDAAYKVDLDIYQKAMKGVFTTSINKHTIDESPMVYKKPKLILENITEQIDIEF
FMKPIYNLKADK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatttaacggaaaatacaataatggaaaaatactacttgattatgtggataca
aatgttattacacaattaaaaacgatattagatacggaatgtttttcaaattcaaacatc
gttgttatgccagattgccatatatctagtggcggtgtaatggttggttttacaatgacg
ttgaatgattatattattccttcaatcgtaggagttgatatcgggtgtggtgtgagtgca
tattatctagggcggatgaaaacagtaaagtctgaaaaacttgataagtttatccgaaaa
aatatcccaataggatcaaatatccacgatgaaccagtaattgaaccggaagagattgct
gaggcaattgagagacttggtttaaattataattacgtaatgagcagtattgcaaccctt
ggtggtggaaatcattttattgaaattgataaagatgaaaataatcatttttggctcgta
atccatactggttcaagacattttggatttgaaattgcaaaacatcatatgaatgtcgca
aaagaaaatatgaaacaattattcggagaaaactataaaggttttgaatacttatctaaa
aaagaagataaagatgcttatttaaaagatctttcgattgcgcaacactttgcttcatta
aatcgtgaacaaattgcgaaaattattatcggaaaatattttaaattagattttgatgga
attaggaaaatcgaatcaatacataattatatcgatcttaaaaacaatatcttaagaaaa
ggtgcaatttcagctactgaaggcgaagaagtgattattccttttaatatggcatttggt
tgtgccgttggaaaaggtaaaagttcaggtgactataatttctcagcaccacatggagca
gggcgtattatgagcagaacagatgcagcatataaagtagacttagatatttatcaaaaa
gcgatgaaaggtgtctttacaacatcgatcaacaaacatacaattgacgaatctccaatg
gtgtataaaaaaccgaaattaatacttgaaaatattactgaacagattgatatcgaattt
tttatgaagccgatttacaatttaaaagcagacaaataa
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