Arthrobacter citreus: HPK19_06220
Help
Entry
HPK19_06220 CDS
T06606
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
acit
Arthrobacter citreus
Pathway
acit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPK19_06220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acit03000
]
HPK19_06220
Transcription factors [BR:
acit03000
]
Prokaryotic type
Helix-turn-helix
Other families
HPK19_06220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_1
TPR_2
TPR_8
TPR_12
TPR_10
HTH_19
TPR_INTS8_3
HTH_31
ARM_TT21_C
TPR_7
DUF4810
DUF489
Motif
Other DBs
NCBI-ProteinID:
QKE72420
LinkDB
All DBs
Position
complement(1195867..1197114)
Genome browser
AA seq
415 aa
AA seq
DB search
MLVGKIIKFYRVKNGISQSMLCKGICSKSYLSRFESGKSTLSLEIITILSERLGIDLNEK
LDSYNCIEKYLDELNTALIMQKTDQIDEIYNNLQNIPFVTSTKYAVQSLLLVARFYLHKK
MLKKAKNTIDKVEREYLHLTDYEKNFLLHVKGIYYISNYRTTVSVDMRSAVRVLNQINSR
TYKNKEFYYHLALAHHFAGSKVLAYIYARKALYYFNKTYNYNQAINVQSLLLFQHDHDED
ISFEELVQKYNTIIHTCEIVGAHLQKGILLNNLGVIYFKRKNYEKASSYFKQSLSLTENS
SIYYLRRFYNYIEACTEGNLLKKEELLELIDLGSMQAEKRQSTIHCTLFMLLKLNFESNK
QRYFDFLSEIAIPQFKSTNNLSYYGQYGKKLYSYYIENNQYKKAIELELEFSSTI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttagtcggcaaaataattaagttttaccgtgttaaaaatggaattagtcaatcaatg
ttatgtaaaggaatatgctctaaatcatatttaagtagatttgaaagtgggaagtctact
ttatctcttgaaattataactatattatctgaacgattaggtattgatttgaatgaaaag
ttagattcttataattgtattgaaaaatatttagatgagttaaatacagctcttataatg
caaaaaactgatcaaattgatgaaatctataacaaccttcagaatatcccctttgttacg
tcaacaaaatatgcagttcaatctttattattggtggctagattttatcttcataagaaa
atgttaaaaaaagctaaaaatacaattgataaagtcgaaagagaatatttacatcttacc
gattatgaaaaaaatttccttttgcatgtgaaaggtatatattacattagtaattatcga
actactgtaagcgtggatatgagatctgctgtaagagtattaaatcaaataaatagtcgc
acatataaaaataaagaattttattaccatctagcactagcacatcattttgcaggctct
aaagtattagcatatatctatgcaagaaaagcactatactattttaacaagacttataac
tataatcaggcaataaatgtccagtccttattattatttcaacacgatcatgatgaggac
attagctttgaagagttagtccaaaaatacaatactatcattcatacttgtgaaattgta
ggtgctcatttacaaaaagggatattattaaataatttaggtgttatatattttaaaaga
aaaaattacgaaaaagcctcatcatactttaaacaatctctaagtttaacagaaaattct
tcaatctattatttgcggcgtttttataattatattgaagcctgtactgaaggaaattta
ctaaaaaaagaagaactattagagttaatcgacttaggtagtatgcaagctgaaaaacgt
caaagtacaatacattgtactttatttatgcttttaaagttgaactttgaaagcaataaa
cagagatattttgattttttgagtgaaatagccattccacagtttaaatcaacaaataac
ctctcttattacggacagtatggaaaaaaactatattcatattatattgagaataatcag
tataaaaaagcaattgaattagagctagaatttagttcaacgatttaa
DBGET
integrated database retrieval system
