Arthrobacter citreus: HPK19_06325
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Entry
HPK19_06325 CDS
T06606
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acit
Arthrobacter citreus
Pathway
acit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPK19_06325 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acit03019
]
HPK19_06325 (recQ)
03400 DNA repair and recombination proteins [BR:
acit03400
]
HPK19_06325 (recQ)
Enzymes [BR:
acit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPK19_06325 (recQ)
Messenger RNA biogenesis [BR:
acit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPK19_06325 (recQ)
DNA repair and recombination proteins [BR:
acit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HPK19_06325 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HTH_40
RQC
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QKE72440
LinkDB
All DBs
Position
complement(1220905..1223019)
Genome browser
AA seq
704 aa
AA seq
DB search
MLTVARENLKKYFGYENFRAGQEQIIERVLSGKHTAGIMPTGGGKSICYQIPATILQGVT
LVISPLISLMKDQVDALHQVGIPSTFINSSLSYNEVNERMMDLSYGEYKILYVAPERLES
ESFINELKKLPILLVAVDEAHCISSWGHDFRPSYLRIKNLIQELPTKPTILALTATATPQ
VKSDICDQLGIIEETAIITGFERENLSFKVIRGQNRLDYINNYIKQNKNESGIIYAATRK
EVDNITIKLKNLGISVGKYHAGLSDVERSKQQDAFLQDNINVMVATNAFGMGIDKSNVRY
VIHYQMPKNMESYYQEAGRAGRDGLESECILLFSAQDVQIQRFLIEQSTFDPNRLKQEIS
KLQSMKDYSYCETCLQAFILKYFGDESEHVCGKCSNCIDQRTAIDITIDAQIVLSCIIRM
GERFGKTMVASVLTGSTNKKLLDFNFHTLTTYGLFKGRTLKSVGDLIDYLTSEQYIGVTS
GKFPLLTVTNSGREVLLNKINVMKKEDIQVVETTNVDNDLFNKLRSLRKEIASELGVPPF
VVFSDSTLRDLCNLLPTTEEEFLQAKGVGLQKQQKFGKQFIEVIQKYKEDNQIEEQIVRP
KTQTIKKVPSHTISFESYQNGLTIAEIANERGLNTTTVENHILQGAMEDDQFDWDEVVPS
DLENQIKEVIKIVGSEKLRPIKDELPAEISYFMIKAVIMKSATV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgctaacagttgcaagagaaaacttaaaaaagtattttgggtatgaaaattttagagcg
ggacaagaacaaattattgaacgagttttatcaggcaaacacacggctggtattatgcca
acaggtggtggaaagtcgatttgttatcaaattccagcgactattctccaaggagttacc
ctcgtcatttctcctttaatctcattaatgaaagaccaggtagatgcattgcatcaagta
ggtataccttccacatttattaatagttcactttcttataatgaagtaaatgaaagaatg
atggatttaagctatggagagtataaaattttatatgttgctccagaacgattggaatca
gagagttttataaatgagttgaaaaaattgccaattttactcgtggcagtagatgaagct
cactgtatctcttcatggggacatgattttaggccaagctacttacgcataaaaaactta
attcaagagcttcctacaaaacctacaatattagccctaactgcaactgcaactccgcaa
gttaaatctgatatttgtgatcagctaggtattatagaggaaaccgcgattattacagga
tttgaacgagaaaatttgtcatttaaagtgataagaggtcaaaatcgattagattatata
aataattacataaaacaaaataaaaacgaatctggtattatttacgctgcaactagaaaa
gaagtagataatattacaattaagttaaagaatcttggtatttctgttggtaaataccat
gcaggtttaagcgatgttgagcgatcaaaacaacaagacgcatttttacaagataatatt
aatgtgatggttgctacaaatgcatttggaatgggaattgacaaaagtaatgtacgttac
gtaatccattaccaaatgcctaaaaacatggaaagttactatcaagaagcaggaagagct
gggcgagatggcttagaaagtgagtgcatattactttttagtgcacaagatgtacaaatt
caaagatttttaattgagcagtctacttttgatccaaatagactgaaacaagaaatttca
aagctacaatcaatgaaagattacagctattgcgaaacatgtttacaggcttttatttta
aaatactttggtgatgaaagtgaacatgtttgcgggaaatgtagtaattgcatcgatcaa
cgtactgcaattgatattacgattgatgctcaaattgttttatcctgtataattcgaatg
ggagaacgattcggtaaaacgatggtagcttcagttttaaccggatctacgaataaaaaa
ttactagactttaattttcatacattaacgacatacggattattcaaaggtcgaacgctt
aaaagtgttggagatttaatcgattatttaacatccgaacaatatattggcgttactagt
ggcaaatttccattattaacggttacaaatagtggaagagaagttttattaaataaaata
aatgtaatgaaaaaagaagatatccaagtagttgaaacaactaatgttgataatgatcta
tttaataaattacgtagtttacgaaaagaaattgctagcgaacttggtgtaccaccgttt
gttgttttttctgatagtacattacgagatttatgtaacttattacctactactgaagag
gaatttctacaggcaaaaggtgtcggattacaaaaacaacaaaaatttggtaagcaattt
atagaagtaatccagaaatataaagaagataatcagattgaagagcaaatagtgcgaccg
aaaactcaaaccataaaaaaagtgccttctcatacaatctcatttgaatcttatcaaaat
ggtcttacgattgctgaaattgcaaatgagagaggtttaaacacaactacagttgaaaat
catattctacaaggtgcaatggaagatgatcaatttgattgggatgaagtagttccaagt
gatcttgaaaaccaaattaaggaagtaattaaaatagttggaagcgagaagctaagacca
attaaggatgaattgcctgctgaaattagttattttatgataaaagctgtaattatgaag
tctgcaactgtttaa
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