Arthrobacter citreus: HPK19_08860
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Entry
HPK19_08860 CDS
T06606
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
acit
Arthrobacter citreus
Pathway
acit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HPK19_08860
09124 Replication and repair
03420 Nucleotide excision repair
HPK19_08860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acit03021
]
HPK19_08860
03036 Chromosome and associated proteins [BR:
acit03036
]
HPK19_08860
03400 DNA repair and recombination proteins [BR:
acit03400
]
HPK19_08860
Enzymes [BR:
acit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HPK19_08860
Transcription machinery [BR:
acit03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HPK19_08860
Chromosome and associated proteins [BR:
acit03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HPK19_08860
DNA repair and recombination proteins [BR:
acit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HPK19_08860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
QKE72903
LinkDB
All DBs
Position
complement(1721814..1724087)
Genome browser
AA seq
757 aa
AA seq
DB search
MENCIKVSVRSLVEYAHTAGSIDLTYKSSVSLIEGTKAHQKIQSEYGESDVKERHISGTV
PYKQLEFQIEGRCDGLLLNDDQYIIEEIKSTMKDLNEINENSYPVHWAQAKVYGYFICEE
LQLEQITIKLTYVNILTEQKMSFYLLFTKNDLTNYLYKMLESYYPFAKWKYDHIELRNQT
IKDLSFPFPSFRKGQRKLAGAVYQTIQESNNLFAIAPTGIGKTVSTIFPTVKSMGEDRIN
RMFYLTSKTITRTVAEEAFKRMTDQGLCISCTTITAKDKICFKEETICQKEYCEFANGYY
DRINGAVLDILSSETAFTREKIEEYARKHTVCPFEYSLDLLNSSDAIICDVNYIFDPRVS
LKRLFDEHKRSSVLLIDEAHNLVDRAREMYSASIFKSKFLELKNRYKSIKDDLYESVNVI
NKRFIELRKIWKDTVAPVSKEFDEELIELLHKFNEIAEIKLQELDEDENKQILLDTYFES
LNFVKIAEFFDEQYICYYELYKSEVHVKLFCLDPSKVVNDVIKKFRSTIYFSATLTPVQY
FQDMLGDQDRDYTITIDPPFSKEQLQVTIDSLSTRYQDREKNLERLIDTIYKEISKSKGN
YLVFYPSYQYLIQSIELFQTKYPTIRTIVQENGMSEFDREDFLLQFNSLNEKTLVGFAVL
GGIFSEGIDLKGDRLNGVVVIGVGLPQICLERNILKDHFNSVGKNGYYYAYVFPGMNKVM
QAGGRVIRSETDKGTLLLIDDRYKSALYQNLLPAEWK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaattgtataaaagtttcagtacgttcgctagttgagtatgctcatacagcggga
agtattgatttaacatataaaagttcggtttcattaatcgaaggaacgaaggcacatcaa
aaaattcaaagtgaatacggagaatctgatgtaaaagaacgacatatttctggaactgtc
ccatataaacaattggaatttcaaattgaaggtagatgtgacggattattattaaatgat
gatcaatacataatagaagaaattaaatcaacaatgaaggatttgaatgaaataaatgaa
aattcttatccggttcattgggctcaagcaaaagtatatgggtattttatttgtgaagaa
ttgcaacttgaacagatcaccatcaagcttacttacgtgaatattttaacggaacaaaaa
atgagcttttatcttttgtttacaaaaaatgatttaactaattatctgtataagatgtta
gagagctattatccttttgcaaaatggaagtatgatcatattgaattacgtaatcaaacg
attaaagatttaagttttccatttccttcatttcgaaaaggacaaaggaaactagctgga
gctgtatatcaaacaatccaagaaagtaataatttgtttgctatcgctccaacgggaatt
ggtaaaactgtttcaactatttttccgactgttaaaagtatgggtgaggatcgtataaat
cgaatgttttacttaacatcgaaaacgattactaggactgttgctgaagaagcgtttaag
cgaatgacagatcaaggattatgtatatcatgcacaacgattacggcaaaagataaaatt
tgttttaaagaagagacgatttgtcaaaaagaatattgtgaatttgctaatggatactat
gatcggataaatggggctgtgcttgatattctttcgtctgaaacggcttttacacgagag
aaaattgaagaatatgcccgaaaacatacagtctgtccatttgaatattcgttagattta
ttaaattcttcagatgccattatttgtgatgttaattatattttcgatcctagagtatca
ttaaaacggttattcgatgagcataaacgtagttcggtattattgattgacgaggctcat
aatcttgtagatcgtgcgagagagatgtattctgcaagtatttttaaatctaaattttta
gagttgaaaaatagatataaaagtattaaagatgatttatatgaatctgtaaatgtcatt
aataagcgatttatagaattaagaaaaatttggaaggatactgtagctcctgtatcaaag
gaatttgatgaggaattaattgagcttcttcacaaatttaatgaaatagcagaaattaaa
ttgcaggaattggacgaggatgaaaataaacaaattctactagatacgtattttgaatca
ctcaactttgttaaaatcgcagagttttttgatgaacagtatatttgctactatgagctt
tataaaagtgaggttcacgtaaaactattttgccttgatccatctaaagtagtaaacgat
gttataaaaaaatttcgctctactatttatttctcagcaaccttaacgccagtacaatat
tttcaagatatgcttggcgatcaagatcgtgattatacgattacgattgatccgcctttt
agtaaagaacaacttcaagtaaccattgactctttatcaacccgatatcaagaccgtgaa
aaaaatttagaaagattaatcgatacgatttataaagaaatttcgaaaagtaaaggaaat
tatttagttttctatccttcttatcaatatctcattcaaagtatcgaattatttcaaact
aagtatccgactattagaacaattgttcaagaaaatggtatgtcagaatttgatagagaa
gattttctattacaatttaatagtcttaatgagaagactttagttggatttgctgtatta
ggtggaattttctccgaggggatcgatttaaagggcgatcgattaaatggtgtcgtagta
atcggtgtaggattgccacaaatctgtttagaaagaaatattttaaaagatcattttaat
tcggttgggaaaaatgggtattattatgcatatgtctttcccgggatgaataaagtcatg
caagcaggtggaagagttatccgatcagaaacggataaagggactttgttactaattgat
gatcgatataagagtgcactttatcaaaatttactacctgcagaatggaaatga
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