Arthrobacter citreus: HPK19_09565
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Entry
HPK19_09565 CDS
T06606
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acit
Arthrobacter citreus
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acit03032
]
HPK19_09565 (topA)
03400 DNA repair and recombination proteins [BR:
acit03400
]
HPK19_09565 (topA)
Enzymes [BR:
acit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPK19_09565 (topA)
DNA replication proteins [BR:
acit03032
]
Prokaryotic type
DNA Topoisomerases
HPK19_09565 (topA)
DNA repair and recombination proteins [BR:
acit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPK19_09565 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_2
Toprim_3
DUF1246
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QKE73037
LinkDB
All DBs
Position
complement(1878755..1880830)
Genome browser
AA seq
691 aa
AA seq
DB search
MAENLVIVESPSKAKTIEKYLGKKFKVIASMGHVRDLPKSQMGIEIENDYNPKYITIRGK
GPVLKDLRSAAKKAKKIYLAADPDREGEAIAWHIANTLNIDTSSDCRVVFNEITKDAIKE
SFKKPRPINMNLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLIIEREK
EIEIFQPEEYWTIKSKGITKKEAFDTFFYGVNGKKLELGSEAEVEKVLSQIKGDSFEVQS
VTRKERKRNPATAFTTSLLQQEAARKLNMRAKKTMMIAQQLYEGISLGSGGQVGLITYMR
TDSTRISDVATEEAKSYIVETYGADFVATNKKNEKKSDKVQDAHEAIRPTSTLRSPDTIK
AHVSRDQYRLYKLIWERFVASQMSSAVLDTVKVDLTNNNVIFRANGSVVKFPGFMKVYIE
SNDDGTEEKDRLLPPLAEGEKVKMEDILPEQHFTQPPPRYTEARLVKTLEEVGIGRPSTY
VPTLETIQKRGYVSLDNKRFVPTELGQIVFDLVVEFFPEVINIEFTVQMEGDLDKIEDGN
VNWIQIIDQFYKGFEKHLEIAEKEMQKVEIRDEPAGEDCEQCGSPMVFKMGRYGKFMACS
NFPDCRNTKAIVKDIGVKCPTCKDGNIIERKSKKNRIFYGCTNYPECEFLSWDKPIGRPC
PKCDNLLVEKKMKKGIQVQCVSCDYKEDQQV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatttagtgatagtggagtccccttcaaaggctaaaacaattgaaaagtac
ttaggtaaaaaatttaaagtaattgcatcgatgggacatgttcgagatttacctaagagc
cagatggggattgaaatagaaaacgattacaacccaaaatacataacaattcgtggaaaa
gggccagttttaaaggatttaagatcagctgccaaaaaagcaaagaaaatatatctagcg
gccgatccagatcgtgaaggagaagcaattgcctggcacattgctaatacacttaatatc
gatacaagttcagattgtcgtgtagtgtttaatgaaattacaaaagatgctattaaagaa
tcttttaaaaaacctagaccaattaatatgaatttagtagacgcacaacaagctcgacgc
gtattagatcgtttagtaggatataacattagtccattactatggaagaaagtaaaaaaa
ggtttaagtgcaggtcgagttcaatccgtcgcattaagactgattattgaacgagaaaaa
gaaattgaaattttccaacctgaagaatattggacaattaagagtaaggggattacaaag
aaagaagcatttgatacatttttttacggtgttaatggaaaaaaattagaattaggctca
gaagctgaagtagaaaaagttttatcacaaataaaaggtgatagcttcgaagttcaaagt
gtcactagaaaagaacgtaagcgtaatccagctactgcatttactacttctttacttcaa
caagaagcggctaggaaattgaatatgcgcgctaagaaaacgatgatgattgcccagcaa
ttatatgaaggaatctctttaggtagtggagggcaagtcggactaatcacttacatgaga
actgactcgacacgtatttcagatgttgcaactgaagaagcaaaatcttatattgttgaa
acatacggcgctgattttgttgctacaaataaaaaaaatgaaaaaaaatcagataaagta
caagatgcacacgaagcaattaggccaacatctacattgcgttcaccagatacgattaaa
gcacatgtaagccgagatcaatatcgactatataaattaatatgggaacgatttgttgct
agtcagatgtcatcagcagtgcttgatacggttaaagttgatctaactaataataatgta
atatttagagcaaatggttctgtcgttaaatttcccggcttcatgaaggtttatattgaa
agtaatgatgatggtactgaggaaaaagatcgcttacttccaccactagctgaaggtgaa
aaggttaaaatggaagatattttacctgaacaacattttacacagccacctccacgttat
acagaggcaaggctagtaaaaacgcttgaagaggtcggaattggtcgaccatcaacttac
gtaccaacattagaaactattcaaaagcgtggatatgtttctttagataataaacgattt
gtaccaactgaacttggtcaaatagtgtttgatttagtcgttgaatttttcccagaagtc
attaatattgaatttacagttcaaatggaaggtgaccttgataaaattgaagacggcaat
gtgaattggattcaaatcattgatcaattttataaaggttttgaaaaacacttagaaata
gcagaaaaagaaatgcaaaaagttgaaatcagagatgaacctgctggtgaagattgcgaa
caatgtggaagccctatggtatttaaaatgggtcgatacggtaagtttatggcatgttca
aacttcccagattgtcgtaatacaaaagcaatcgtaaaagatattggcgttaaatgccct
acatgtaaagacggcaatattattgaacgtaaatcgaaaaagaatcgaattttctatgga
tgcacgaattatcctgaatgtgaattcttatcatgggataagccaatcggaagaccttgt
ccgaaatgtgacaacttattagttgaaaagaaaatgaaaaaaggaattcaagttcaatgt
gtatcttgtgattacaaagaggatcaacaagtgtga
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