Arthrobacter citreus: HPK19_11410
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Entry
HPK19_11410 CDS
T06606
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
acit
Arthrobacter citreus
Pathway
acit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPK19_11410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acit03000
]
HPK19_11410
Transcription factors [BR:
acit03000
]
Prokaryotic type
Helix-turn-helix
Other families
HPK19_11410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
HTH_31
TPR_2
TPR_19
TPR_12
CFAP70_mid_TPR
VMAP-M1
Motif
Other DBs
NCBI-ProteinID:
QKE73374
LinkDB
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Position
complement(2303311..2304555)
Genome browser
AA seq
414 aa
AA seq
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MIQGKIIKFYRELQGLRQADLGNQICSSTHVSKIERGITEVSEETIELLAKRLQIDMQDE
IDAYLSLDSLLNEWHDSIILKLNSKANSIKTKLERINLLKIPDFYQAYTLILTRYYLLIG
ESKIAKSLIEEMDCWRELSLYDQNMRNHIKGKFYLDYQGEYNQAISYLKKINLIYYNNPE
YYYDLAVAYMCMNSRILAYHYANKALQFFTSANSFNRVLETEMLMLIQVEQEEIFDTKES
GYPRLIEMADNLGLIDQKAKLLHNYAYQLFRNGYYEKAFENYSQSLMLRDPSHPHYLVTL
EGYLNTATKLGLQSETELLKVAHEGLSLAKKLNDTMYLHYFQLHVFKIQNLKDEYYDYLE
SAAYPFFKNKGYGLAEETYEIKLFDYYFKKGDVERANQFTQSIVNRFRKNNELV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgatccaagggaaaatcattaaattttaccgtgaacttcaaggattaaggcaagcggat
ttagggaaccaaatttgttcaagtacccatgttagcaaaattgaacgtggtattacagaa
gtatcagaagaaacaatcgagttgttagctaaaagattacaaatcgatatgcaagatgag
attgatgcatacttaagcttggactcattattaaatgaatggcatgattcaattatttta
aagctaaattcaaaggcaaatagcataaaaactaagttagaaagaatcaatctattaaaa
atcccggatttctatcaagcatacacgttaattttaactagatattatttattaattgga
gaaagtaagattgctaaatctttgatagaggaaatggactgttggcgcgaactttcgcta
tatgatcaaaacatgcgaaatcatattaaaggtaagttttacctcgattatcaaggtgaa
tataatcaagctatttcttatttgaagaaaattaatctaatttattataataatcctgaa
tattattatgatttagctgttgcttatatgtgtatgaattcccgaatactagcttatcat
tatgctaataaagcacttcaattttttactagtgcaaacagctttaatagagtacttgaa
acagaaatgctaatgctaatccaagttgaacaagaagaaatttttgatacaaaggagtct
ggttacccaagactaatagaaatggccgacaatttaggattaattgatcaaaaggcaaaa
cttcttcataattacgcttatcaactatttcgaaatgggtactacgaaaaagcattcgaa
aattatagtcagtctttgatgctacgtgatcctagtcatccacattatctcgtaacatta
gaaggttatctaaatactgctacaaagttaggtctacaatctgaaacagagttgctaaaa
gtagcacacgaaggtctttcattagctaagaagttaaatgatacaatgtatttacattat
tttcagttacatgtatttaaaattcaaaatttgaaagacgaatattatgattatttagag
tcggctgcgtatccattttttaagaataagggttatgggcttgccgaagagacatatgaa
attaaattgtttgattactatttcaaaaaaggcgatgtcgaacgagctaatcagttcact
cagtcaattgtaaatagattcaggaaaaacaatgagcttgtttaa
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