Arthrobacter citreus: HPK19_12390
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Entry
HPK19_12390 CDS
T06606
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
acit
Arthrobacter citreus
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acit03019
]
HPK19_12390 (yhaM)
Messenger RNA biogenesis [BR:
acit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HPK19_12390 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
tRNA_anti_2
YfeC-like
Gp6-like_1st
Motif
Other DBs
NCBI-ProteinID:
QKE73553
LinkDB
All DBs
Position
complement(2550419..2551357)
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AA seq
312 aa
AA seq
DB search
MDKKVYDHEVGERFVTYLFVKAVTKGVASNQKSFLSLTLQDQSGDIEAKLWDISSEQEAS
YAEGTIVKVEGELHDYRGKLQLKLRQIRPVKDTDEVNPEDFFARAPVSKEVLYEKITSYI
NNMTNEKLKKLTEYLVLKNQEEFLDFPAATKNHHEFVSGLAYHVFCMLQLGESIANLYPS
LNKDLLYAGIILHDLGKVRELSGPVSTKYTVEGNLLGHISLMAIEIGNASIELGIEGEEV
TVLQHLILSHHGKYEYGSPKLPLIKEAEILHYIDNIDAKMNMLDRALERVEPGEYTERIF
PLENRSFYKPKF
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaagtatatgatcatgaagttggcgaacgttttgtgacgtatttatttgtt
aaagcagttactaaaggtgtagcaagtaatcaaaaatcctttttatcattaactttacaa
gatcaaagtggagatatagaggcgaagctttgggatatttcttcagagcaagaagcatcc
tatgccgagggaacaattgtaaaggttgaaggtgagctacacgattatagagggaaactt
cagcttaaattacgccaaattcgtccagtaaaagacacagatgaggtaaatccagaagac
ttttttgcgagagcaccagtttcgaaagaagtattgtatgagaaaattacttcttacatc
aataatatgacgaatgaaaaacttaagaaactaactgaatatctagtattaaaaaatcaa
gaagaattccttgattttccagcagcaactaagaatcatcacgaatttgtttctggatta
gcttatcatgttttttgtatgctgcaattaggtgaatctatagcgaatttatatccttcg
cttaataaagatttactatacgctggaattatattgcatgatttaggcaaagtaagagag
ttatcgggtccggtttcaacaaaatatactgttgaaggtaatttgctaggtcatatttca
ctaatggcaattgaaattggtaatgcctcgattgaattaggaattgagggagaagaagtt
actgtacttcagcatcttattttaagccatcatggtaagtatgaatatggtagtccaaag
ctacctttaattaaagaagcggaaatattgcattatattgacaatattgatgcgaaaatg
aatatgttagatcgtgcgcttgaaagagttgaaccaggtgaatatactgagcgcattttc
ccactagaaaatcgtagtttttataaaccaaaattttaa
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